Gene Mkms_3446 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_3446 
Symbol 
ID4611374 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp3615199 
End bp3615855 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content72% 
IMG OID639793120 
ProductThiJ/PfpI domain-containing protein 
Protein accessionYP_939430 
Protein GI119869478 
COG category[K] Transcription 
COG ID[COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.458276 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGCCC AGATCGTGCT GTTCGACGGA TTCGACCCAC TCGACGTCAT CGCGCCCTTC 
GAGGTCCTCG TCGCCGGCAG CGACGCCGTC GGGGGTGACC TGACCGTGGA ACTCGTCTCC
GCGGAGGGAC CGCGGCCGGT GGTCAGCGGC AGCCGGGGCC TGGTCCTGCA CGCGACGTCC
GGATTGGACC CGCACCGGCC GGGTTTCGTG ATCGTGCCGG GCGCCGCTGG GCCGATCGAG
GGTGACCCCG ACGAGGGGGT CGAGACCATC CCGGTCCTGT TGGCGCGCTT CGGCGATACG
GTGGCGATCC CGCTGATGCG CCGGGCCATG GCCGATCCGG AGGTCACGGT GGCCACAGTC
TGTGGCGGCT CCCTCGCCCT GGCCATGGCC GGTTTGCTCG AAGGCAGGTT CGCCGTCACC
CACCACCTCG GCATGGACAT GCTCGAGGCG ACCGGCGCGC ACGCCGTACC CGCCCGGGTG
GTCGACGACG GCGACCTGGT CACCGCCGCG GGGGTCACCT CCGGGCTGGA GTTGGCGCTG
CACCTGCTCG ACCGCAGCTA CGGCCCGCAG ATCGCGGCCG CGGTCGAATC GCTGTTCGCC
TATGAACGGC GCGGCACGGT GTGGAGCAAC CGCGGCCGCA TCCCGGTGTC GGTGTGA
 
Protein sequence
MDAQIVLFDG FDPLDVIAPF EVLVAGSDAV GGDLTVELVS AEGPRPVVSG SRGLVLHATS 
GLDPHRPGFV IVPGAAGPIE GDPDEGVETI PVLLARFGDT VAIPLMRRAM ADPEVTVATV
CGGSLALAMA GLLEGRFAVT HHLGMDMLEA TGAHAVPARV VDDGDLVTAA GVTSGLELAL
HLLDRSYGPQ IAAAVESLFA YERRGTVWSN RGRIPVSV