Gene Mkms_3409 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_3409 
Symbol 
ID4611336 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp3575042 
End bp3575539 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content69% 
IMG OID639793082 
Productprotein tyrosine phosphatase 
Protein accessionYP_939393 
Protein GI119869441 
COG category[T] Signal transduction mechanisms 
COG ID[COG0394] Protein-tyrosine-phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.198502 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.488282 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCTGAAA CGCCGTTGCA CATCACGTTC GTCTGCTCGG GCAACATCTG CCGCTCGCCC 
ATGGCCGAGA AGATGTTCGC CCACCAGATC GCCGAACGCG GGCTGTCCGG GGCGGTCCGG
GTCAGCAGTG CGGGCACCGG AGGCTGGCAT GCGGGTGATC CCGCCGACCG GCGGGCGATC
CACGTGCTGC GCGCGCACGG TTACCCGAGC GGGCACGAGG CCGCCCAGGT CGACGACGAC
CACCTGGCCG CCGATCTGGT GGTCGCGCTG GGCCGCAACC ACGTCCGGAT GCTGACCGAA
CTGGGTGTAC CGCCCGGGCG GCTGCGCATG CTGCGCTCGT TCGATCCGCG TTCGGCAGCA
CATCCCCTCG ACGTGGAGGA TCCCTACTAC GGCACCCAGG ACGATTTCGA GGACGTGTTC
CGGGTGATCG AGGCGGCACT GCCCGGGCTG CACGACTGGG TCGACGAACA GCTCACCATC
CGGGGTATCG CGAGCTGA
 
Protein sequence
MSETPLHITF VCSGNICRSP MAEKMFAHQI AERGLSGAVR VSSAGTGGWH AGDPADRRAI 
HVLRAHGYPS GHEAAQVDDD HLAADLVVAL GRNHVRMLTE LGVPPGRLRM LRSFDPRSAA
HPLDVEDPYY GTQDDFEDVF RVIEAALPGL HDWVDEQLTI RGIAS