| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mkms_3394 |
|---|
| Symbol | panB |
|---|
| ID | 4611320 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. KMS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008705 |
|---|
| Strand | + |
|---|
| Start bp | 3561915 |
|---|
| End bp | 3562763 |
|---|
| Gene Length | 849 bp |
|---|
| Protein Length | 282 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639793067 |
|---|
| Product | 3-methyl-2-oxobutanoate hydroxymethyltransferase |
|---|
| Protein accession | YP_939378 |
|---|
| Protein GI | 119869426 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0413] Ketopantoate hydroxymethyltransferase |
|---|
| TIGRFAM ID | [TIGR00222] 3-methyl-2-oxobutanoate hydroxymethyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.427087 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGAGC AGACTGTCTA CGGTGCTGCG AGCGATCAGC CCACCCCCAA GCCGCGCGTC
AAGGTCCGCA CCACCCACCT GCAGAAGTGG AAGGCCGAAG GGCACAAGTG GGCGATGCTC
ACCGCCTACG ACTTCTCCAC CGCCCGGGCA TTCGACGACG CCGGCATTCC GGTGTTGCTC
GTGGGCGACT CGGCCGCCAA CGTCGTCTAC GGCTACGACA CCACGGTGCC GATCACGATC
GACGAGTTGA TCCCACTGGT GCGCGGCGTG GTGCGGGGCG CACCGCATGC GTTGGTGGTG
GCGGATCTGC CGTTCGGCAG CTACGAGGAA GGCCCTCGCC AAGCCCTGGC CACGGCCACC
CGGTTCCTCA AGGAGACCGG TGCGCACGCG GTCAAACTCG AGGGCGGCGA ACGCGTCGCC
GAGCAGATCG CCACGCTGTC CGCGGCGGGC ATCCCGGTCA TGGCGCACAT CGGCTTCACC
CCGCAGAGCG TCAACGGCCT GGGCGGCTTC AAGGTCCAGG GCCGTGGCGA CGCCGCCGAG
CAGACCATCC ACGACGCGAT CGCGGTCCAG GAGGCCGGCG CGTTCTCGGT GGTGATGGAG
ATGGTGCCCG CCGAACTGGC CACCCAGATC ACCGGCAAGC TGACCATCCC GACGGTCGGC
ATCGGCGCCG GGCCGAATTG CGATGCGCAG GTGCTGGTCT GGCAGGACAT GGCCGGACTG
ACGTCGGGCA GGACGGCGAA GTTCGTGAAG CGCTTCGGCG ATGTCGGCGC CGAATTGCGC
CGTGCGGCAA GCCAGTACGC CGACGAGGTG GCGGCCGGGG TGTTCCCGGC CGAGGAGCAC
AGCTTCTAG
|
|---|
| Protein sequence | MSEQTVYGAA SDQPTPKPRV KVRTTHLQKW KAEGHKWAML TAYDFSTARA FDDAGIPVLL
VGDSAANVVY GYDTTVPITI DELIPLVRGV VRGAPHALVV ADLPFGSYEE GPRQALATAT
RFLKETGAHA VKLEGGERVA EQIATLSAAG IPVMAHIGFT PQSVNGLGGF KVQGRGDAAE
QTIHDAIAVQ EAGAFSVVME MVPAELATQI TGKLTIPTVG IGAGPNCDAQ VLVWQDMAGL
TSGRTAKFVK RFGDVGAELR RAASQYADEV AAGVFPAEEH SF
|
|---|
| |