| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mkms_3388 |
|---|
| Symbol | |
|---|
| ID | 4611314 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. KMS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008705 |
|---|
| Strand | - |
|---|
| Start bp | 3551938 |
|---|
| End bp | 3552798 |
|---|
| Gene Length | 861 bp |
|---|
| Protein Length | 286 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639793061 |
|---|
| Product | Fis family transcriptional regulator |
|---|
| Protein accession | YP_939372 |
|---|
| Protein GI | 119869420 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.695689 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.0265519 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTACT ACGTCAGCCC GGCGTTCGTC GACACCAGCG AGATTCTCGA CATCGCCCGC
GCCGCAGACG AACTCGGATA CGACGGTCTC GGCATCCCGG ACCACGTGGT GAACCTCGAG
ACACTCGAGA CGCCGTATCC GTACACCCGC GACGGAGAGC GGCGCTGGCA GCCGTTCACG
CACTGGCCGG ACCCGTGGGT GCTCGTCGGC GCCCTCGCGC AGGTCACCTC GCGGTTGAAG
TTCGTCACCA CGGTGTACGT ACCGGCGATG CGCGACCCCT ATTCGGCGGC TAAGGCGATC
GGCACCGCGG CCTACCTCGC CGGCGGCCGG GTCGAACTCG GTGTCGGGGT CGGCTGGTGC
GAGGACGAAT TCCGGTTGAT GGGGCAGCGA TTCGACCGTC GCGGCAGGCG CACCGACGAG
ATGCTCGACC TGTTCCGGGC ATTGTGGCAG CCGGGCTGGA CCGAGTTCGA CGGCGAGTTC
TACCCCACGC CGCGCCTGGA GATGGAGCCC ACCCCGCCGC ACATCCCGAT CTACGTCGGC
GGCCTCAGCG ATGTCGCGTT CCGCCGTGCC GCGCGCAACG ACGGCTGGAT CGGCGATCTG
ATCACCACCG ACCGGGCGAT CGCCGTGGCG CATCGGCTTC ACGAACTACG CACCGCGGCA
GGGCAATCCG TGGACGACTT CACGATCCTC ACGCCGCTGA CCGACGCGCT GGTGCGCGCG
GACTACGACC GTGCCGAGGC CGCGGGCATC ACCCACATCC TGACCATGCC GTGGATGTTC
TACACCGGTG CCGACGCGAC GCTGGCCGAG AAGATCGACG GGATGAAGCG GTTCCGCAAG
GACCTCGGGC TGGACCGCTA G
|
|---|
| Protein sequence | MKYYVSPAFV DTSEILDIAR AADELGYDGL GIPDHVVNLE TLETPYPYTR DGERRWQPFT
HWPDPWVLVG ALAQVTSRLK FVTTVYVPAM RDPYSAAKAI GTAAYLAGGR VELGVGVGWC
EDEFRLMGQR FDRRGRRTDE MLDLFRALWQ PGWTEFDGEF YPTPRLEMEP TPPHIPIYVG
GLSDVAFRRA ARNDGWIGDL ITTDRAIAVA HRLHELRTAA GQSVDDFTIL TPLTDALVRA
DYDRAEAAGI THILTMPWMF YTGADATLAE KIDGMKRFRK DLGLDR
|
|---|
| |