| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mkms_3190 |
|---|
| Symbol | |
|---|
| ID | 4611114 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. KMS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008705 |
|---|
| Strand | - |
|---|
| Start bp | 3349549 |
|---|
| End bp | 3350301 |
|---|
| Gene Length | 753 bp |
|---|
| Protein Length | 250 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639792861 |
|---|
| Product | 20S proteasome, A and B subunits |
|---|
| Protein accession | YP_939174 |
|---|
| Protein GI | 119869222 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0638] 20S proteasome, alpha and beta subunits |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.617763 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.125579 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGTTTCC CGTATTTCAT CTCGCCCGAG CAGGCGATGC GCGAGCGTTC CGAGCTCGCC
CGCAAGGGAA TCGCCAGGGG CCGCAGCGTG GTCGCGCTGG CCTACGCCGA CGGGGTCCTG
TTCGTCGCGG AGAACCCGTC GCGGTCACTT CAGAAGGTCA GTGAACTGTA CGACCGCGTC
GGCTTCGCCG CGGTCGGGCG CTTCAACGAG TTCAACAACT TGCGCAGCGG CGGTATCCGG
TTCGCCGACA CCCAGGGGTA TGCGTATTCG CGCCGCGACG TGACCGGCCG ACAGCTGGCC
AATGTCTACG CGCAGACGCT CGGCACGATC TTCACCGAAC AGGCCAAACC CTACGAGGTG
GAGCTGTGTG TGGCCGAGGT CGCGCACTTC GGCGAGTCCA AAGCGCCGGA GCTCTACCGG
ATCACCTACG ACGGGTCGAT CGCCGACGAA CCCCACTTCG TGGTGATGGG CGGCGCCACC
GAGCCGATCA TCGCCAAACT CAACGACTCC TACACCGAGA ACGCCGAACT CGCCGACGCG
GTGCGTATCG CGGTCGACGC CCTCGAGTCC GGCGGTAACG GGGCCGAGCG ACGCACGCTC
GGCCCGTCGA CTCTGGAAGT GGCGATCCTG GACGCCAACC GGCCCCGGCG GGCGTTTCGC
CGGATCACCG GATCCGCACT CGAAGCGCTT CTGCCGCAGC GGGATGCGGA GGCGTCGGCG
GATGCCGGCG CGGCGGACAA GCCCGCCGAG TAA
|
|---|
| Protein sequence | MSFPYFISPE QAMRERSELA RKGIARGRSV VALAYADGVL FVAENPSRSL QKVSELYDRV
GFAAVGRFNE FNNLRSGGIR FADTQGYAYS RRDVTGRQLA NVYAQTLGTI FTEQAKPYEV
ELCVAEVAHF GESKAPELYR ITYDGSIADE PHFVVMGGAT EPIIAKLNDS YTENAELADA
VRIAVDALES GGNGAERRTL GPSTLEVAIL DANRPRRAFR RITGSALEAL LPQRDAEASA
DAGAADKPAE
|
|---|
| |