Gene Mkms_3166 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_3166 
Symbol 
ID4611001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp3315565 
End bp3316302 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content66% 
IMG OID639792837 
ProductABC-2 type transporter 
Protein accessionYP_939150 
Protein GI119869198 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID[TIGR00025] ABC transporter efflux protein, DrrB family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.591825 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGCTA TCGCGCTCCT GACGCGCCGC ACGCTGGTGC GCGGTCGAGT GGACCTGGTG 
TTCGCCGTGC TCATGCCGAC GTTCGTGTTG GCCGGTCTCG TGCTACTGCT GCAGGATGTC
ATCGCCACCG GCCAGATGAG TTATACGCAA TACGTGTTGC CTGCGGTGGT CGTCCAGGCG
ATGCTGTTCG GTGCGCTGAC CACCACGGAT CGGGCGGCCT GGGACACGAT CAGCGGGCTG
AGCACACGGA TGCGCACACT GCCGATCTCT CCGTACGCGA TGTTGACGGC ACGAATGATC
TACTGCCTGA TCCGGGGCGT GCTGGCGGTG ATCGCGTCGG TACTGGCCGC CCACTGGTTC
GGGTTCCGGT TCACCACCGG GTTCGGGTAC GGCGCGGCCT TCGTCCTGAT GGCACTGACG
CTGACCTTGG CGTTGTCACT AGGTGCGGAT GTGACCGGGA CCAAGGCCGG CCGGACCGAG
GTGGCCAGCC AACTGCTGCT CGTCCCCCAA CTGCTCCTCG TGCTGTTGTC GACGGGCCTG
GCGCCCCTCG AGGCGTTCCC GTCGTGGCTG CAAGGCTTCG TGCAGTACCA GCCGGTGTCA
CAGATCACCG AGGCGATGCG CGGTTTCACC AGCGGTCACG TCGACGCGGG CAATCTCGGC
GTGAGCCTGG CATGGTGCGT CGGTCTGCTG CTGGTTTTCG GCACGATGGC CGTCCGATTG
CAGGGGCGAA CGCCGTGA
 
Protein sequence
MTAIALLTRR TLVRGRVDLV FAVLMPTFVL AGLVLLLQDV IATGQMSYTQ YVLPAVVVQA 
MLFGALTTTD RAAWDTISGL STRMRTLPIS PYAMLTARMI YCLIRGVLAV IASVLAAHWF
GFRFTTGFGY GAAFVLMALT LTLALSLGAD VTGTKAGRTE VASQLLLVPQ LLLVLLSTGL
APLEAFPSWL QGFVQYQPVS QITEAMRGFT SGHVDAGNLG VSLAWCVGLL LVFGTMAVRL
QGRTP