Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mkms_3140 |
Symbol | |
ID | 4610975 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. KMS |
Kingdom | Bacteria |
Replicon accession | NC_008705 |
Strand | + |
Start bp | 3283752 |
End bp | 3285914 |
Gene Length | 2163 bp |
Protein Length | 720 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639792811 |
Product | glycogen debranching enzyme GlgX |
Protein accession | YP_939124 |
Protein GI | 119869172 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
TIGRFAM ID | [TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.257674 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGTCACCC CCGGATCCGG GCCCACTTCA CCGACGCTGC ACACCGTCTG GCCCGGTGAG GCCTATCCGC TGGGCGCGAC GTACGACGGG GCGGGCACCA ACTTCTCGCT GTTCTCCGAG GTCGCCGAAC GCGTCGAGCT GTGCCTGATC GCCAAGGACG GCAGCGAGGA ACGGATCAAC CTCGACGAGG TCGACGGCTA CGTCTGGCAC GCCTACCTGC CCACGGTCAC CCCCGGCCAA CGCTACGGGT TCCGCGTGCA CGGTCCGTGG GATCCGTCGG CGGGACACCG GTGCGATCCG AGCAAGCTGC TGCTCGATCC GTACGGCAAA TCGTTCTACG GCGACTTCCG GTTCGGGCAG GCGCTGTACT CCTACGACCT CGACGCCGAG GACCTCGCCT CGGGCGGTGA CCCCCCACGG ATCGACTCGC GGGGGCACAC GATGACCAGC GTCGTCATCA ACCCGTTCTT CCAGTGGGGC TCCGACCGCG CACCGCGCAC GCCGTACCAC GACACCGTGA TCTACGAGGC CCACGTCAAG GGGATGACCC GGCGGCACCC GGCCGTGCCC GCGGAGTTAC GCGGCACCTA CGCCGGGCTC TGCCATCCGG CGATCATCGA CCACCTCAAG TCGCTCAACG TCACCGCCAT CGAACTGATG CCGGTGCACC AGTTCATGCA CGACCACCGC CTGCTCGACC TCGGATTGCG AAACTACTGG GGCTACAACA CGTTCGGCTT CTTCGCACCG CACAACGAGT ACGCCGCCAA CCAGCACGCC GGCGGCGCGG TCGCCGAGTT CAAGGCGATG GTGCGGTCCT TCCACGCGGC GGGTATCGAG GTCATCCTCG ACGTCGTCTA CAACCACACC GCCGAGGGCA ACCACCTCGG GCCGACCGTC AACTTCCGCG GTATCGACAA CGCCGCCTAC TACCGGCTGC TCGACGGTGA CCTGCGCCTC TACAAGGACT TCACCGGGAC CGGCAACAGC CTCAACGCCC GCCACCCCCA CACCCTGCAG CTCATCATGG ACTCCCTGCG GTACTGGGTG CTGGAGATGC ACGTCGACGG GTTCCGCTTC GACCTGGCCT CGACGCTGGC CCGCGAGTTC TACGACGTCG ACCGACTCTC GGCCTTCTTC GACCTGGTGC AGCAGGATCC GGTGGTCAGT CAGGTCAAGT TGATCGCCGA ACCGTGGGAC ATCGGCGAAG GCGGTTATCA GGTCGGCAAC TTCCCAGGTT TGTGGACCGA GTGGAACGGG CAATATCGCG ACACTGTGCG TGACTACTGG CGGGGAGAAC CCGCAACCCT CGGCGAATTC GCCTCCCGAC TGACGGGATC ATCAGACCTC TACGAGGCCA CCGGACGGCG TCCCAGCGCC TCCATCAACT TCGTGACCTG TCACGACGGG TTCACGATGC ACGATCTGGT GTCCTACAAC GAGAAACACA ACGAAGCCAA CGGCGAGGAC AACCGCGACG GCGAGAGCCA CAACCGGTCC TGGAACTGCG GGGTGGAAGG TCCCACCGAC GATCCGGACG TCATCGCGTT GCGCGGTAAG CAGATGCGCA ACATGCTGGC CACGCTGATG TGCAGCCAGG GCACCCCGAT GATCGCCCAC GGTGACGAGA TCGGCCGCAC CCAGCAGGGC AACAACAACG TCTACTGCCA GGATTCGGAA CTGTCCTGGA TGGACTGGTC GTTGTGCGAG ACCAACGCCG ATCTGCTGGA GTTCACCCGC AAGGTGGTCG CCTTCCGCAA GAACCACCCG GTGTTCCGGC GGCGACGGTT CTTCGAGGGC AAACCGATCC GCAGCGCGGA TCAGGTCCGT GACATCGCCT GGCTGACCCC CGCGGGCACC GAGATGACCC CCGAGGACTG GGGCACCGGC CTGGGCAAGT GCGTGGCGGT CTTCCTCAAC GGTGAGGCGA TCCCGGCCCC CAACGCGCGC GGCGAGCGGG TGGTCGACGA TTCGTTCCTG TTGTGCTTCA ACGCCCACGA CCACGTGCAG GACTTCGTCA CCCCCGACGG CGACTACGCC GAGATGTGGA CCGCCGATCT GGACACCGCC GATCCGACCG GGCACACCGA CGTCGTCGTC CCGGCAGGCG AGAAGATCTC GCTGCAACCC AGATCGCTGC TCGTGCTGCG GAAGACGGCG TGA
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Protein sequence | MVTPGSGPTS PTLHTVWPGE AYPLGATYDG AGTNFSLFSE VAERVELCLI AKDGSEERIN LDEVDGYVWH AYLPTVTPGQ RYGFRVHGPW DPSAGHRCDP SKLLLDPYGK SFYGDFRFGQ ALYSYDLDAE DLASGGDPPR IDSRGHTMTS VVINPFFQWG SDRAPRTPYH DTVIYEAHVK GMTRRHPAVP AELRGTYAGL CHPAIIDHLK SLNVTAIELM PVHQFMHDHR LLDLGLRNYW GYNTFGFFAP HNEYAANQHA GGAVAEFKAM VRSFHAAGIE VILDVVYNHT AEGNHLGPTV NFRGIDNAAY YRLLDGDLRL YKDFTGTGNS LNARHPHTLQ LIMDSLRYWV LEMHVDGFRF DLASTLAREF YDVDRLSAFF DLVQQDPVVS QVKLIAEPWD IGEGGYQVGN FPGLWTEWNG QYRDTVRDYW RGEPATLGEF ASRLTGSSDL YEATGRRPSA SINFVTCHDG FTMHDLVSYN EKHNEANGED NRDGESHNRS WNCGVEGPTD DPDVIALRGK QMRNMLATLM CSQGTPMIAH GDEIGRTQQG NNNVYCQDSE LSWMDWSLCE TNADLLEFTR KVVAFRKNHP VFRRRRFFEG KPIRSADQVR DIAWLTPAGT EMTPEDWGTG LGKCVAVFLN GEAIPAPNAR GERVVDDSFL LCFNAHDHVQ DFVTPDGDYA EMWTADLDTA DPTGHTDVVV PAGEKISLQP RSLLVLRKTA
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