Gene Mkms_3109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_3109 
Symbol 
ID4610944 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp3255827 
End bp3257089 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content69% 
IMG OID639792780 
Producttryptophan synthase subunit beta 
Protein accessionYP_939093 
Protein GI119869141 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0133] Tryptophan synthase beta chain 
TIGRFAM ID[TIGR00263] tryptophan synthase, beta subunit 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.284372 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCGAAC TCGTCGACTC GGACCTGCCG CGCTCCAGTG CGGCCGTCGC CGAACCCACC 
AGCCACGACC CGGACGCCCG CGGCCACTTC GGCCCGTACG GCGGACGCCT CGTTCCCGAG
GCGCTGATGG CGGTCATCGA GGAGGTCACC GCGGCCTACG AGAAGGCCCG TGGCGATCAG
ACGTTCCTCG ACGAACTCGA TCGGCTGCAG CGCCACTACA GCGGCCGTCC TTCGCCGCTG
TACGAGGCCA CCCGGCTCAG CGAGCACGCC GGCGGGACGC GCATCTTCCT CAAACGAGAA
GACCTCAACC ACACGGGTTC CCACAAGATC AACAATGTGC TCGGGCAGGC GCTGCTCGCA
CGTCAGATGG GCAAGACCCG GGTCATCGCC GAGACCGGCG CCGGCCAGCA CGGTGTCGCG
ACGGCCACCG CCTGCGCACT GCTCGGCCTG GACTGCGTGA TCTACATGGG CGCGGTCGAC
ACGGCCCGTC AGGCGCTGAA TGTGGCGCGC ATGCGCCTGC TCGGCGCCGA GGTGGTCTCC
GTGGAGGCCG GTTCGAAGAC GCTCAAGGAC GCGATCAACG AGGCCTTTCG CGACTGGGTC
ACCAACGCCG ACGAGACGTA CTACTGCTTC GGCACCGCGG CGGGCCCGCA CCCGTTCCCG
TTGATGGTGC GCGATTTCCA GCGCATCATC GGCCTCGAAG CGCGGGTGCA GATCCAGGCC
CAGGCCGGCC GGCTCCCGGA TGCGGTGACG GCGTGCGTCG GCGGCGGCTC CAATGCGATC
GGCGTCTTCC ACGCCTTCAT CGACGATCCC CGTGTGCGGT TGATCGGTTA CGAGGCGGCC
GGAGACGGGG TCGAAACGGG CCGGCACGCC GCCACGTTCA CCGGCGGCTC ACCCGGTGCG
TTCCAGGGCT CCTTCTCCTA CCTGCTGCAG GACGAGGACG GCCAGACGAT CGAATCGCAT
TCGATCTCGG CCGGTCTGGA CTATCCAGGC GTGGGGCCCG AGCACGCGCT GCTCAAGGAC
ATCGGTCGCG CCGAGTACCG GCCCATCACC GATACCGAGG CCATGGACGC GTTCTCGCTG
CTGTGCCGCA CCGAGGGGAT CATCCCGGCC ATCGAGTCCG CGCACGCGGT CGCCGGTGCG
CTCAAGCTCG GCCCGGAACT CGGGCCGGGT TCGGTGATCC TGGTCAACCT GTCCGGGCGC
GGTGACAAGG ACGTCGAGAC CGCAGCGAAA TGGTTCGGTC TGCTGGACAA AGGCGGTTCA
TGA
 
Protein sequence
MAELVDSDLP RSSAAVAEPT SHDPDARGHF GPYGGRLVPE ALMAVIEEVT AAYEKARGDQ 
TFLDELDRLQ RHYSGRPSPL YEATRLSEHA GGTRIFLKRE DLNHTGSHKI NNVLGQALLA
RQMGKTRVIA ETGAGQHGVA TATACALLGL DCVIYMGAVD TARQALNVAR MRLLGAEVVS
VEAGSKTLKD AINEAFRDWV TNADETYYCF GTAAGPHPFP LMVRDFQRII GLEARVQIQA
QAGRLPDAVT ACVGGGSNAI GVFHAFIDDP RVRLIGYEAA GDGVETGRHA ATFTGGSPGA
FQGSFSYLLQ DEDGQTIESH SISAGLDYPG VGPEHALLKD IGRAEYRPIT DTEAMDAFSL
LCRTEGIIPA IESAHAVAGA LKLGPELGPG SVILVNLSGR GDKDVETAAK WFGLLDKGGS