Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mkms_3108 |
Symbol | trpA |
ID | 4610943 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. KMS |
Kingdom | Bacteria |
Replicon accession | NC_008705 |
Strand | - |
Start bp | 3255042 |
End bp | 3255830 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639792779 |
Product | tryptophan synthase subunit alpha |
Protein accession | YP_939092 |
Protein GI | 119869140 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0159] Tryptophan synthase alpha chain |
TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.123414 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCGGT TGGGTGGCTT GTTCGACGCT TGCCGAGCGG AGCGACGCGC GGCGCTCATC GGATACCTGC CAACCGGATT CCCCGACGTG CCGGCATCGA TCTCGGCGAT GACAGCGTTG GTCGAATCGG GTTGCGACAT CATCGAAGTC GGCATCCCGT ACTCCGACCC GGGGATGGAC GGCCCGGTCA TCGCCGCCGC CACCGAGGCG GCGCTGCAGG GCGGCGTTCG GGTGCGCGAC ACCCTGACGG CGGTCGAGGC CATCAGCAAC GCCGGCGGGC GCGCAGTGGT GATGACGTAC TGGAATCCCG TGCTGCGGTG GGGGATCGAC GCCTTCGCGA GGGATCTCGC CGCCGCGGGT GGACTGGGTC TGATCACCCC TGATCTCATT CCCGAAGAGG CAGACGAGTG GATGGCGGCT TCCGACGCCC ACGATCTGGA CCGGATCTTC CTGGTGGCCC CGGCGTCGAC GCCCGAGCGG CTGGCCAAGA CGGTCCAGGC GACACGGGGG TTCGTCTACG CGGCGTCGAC GATGGGCGTC ACCGGTGCCC GGGACGCCGT CTCGAGTGCC GCTCCCGAAC TCGTCGCGCG CGTCAAGGAG GTCTCCGACA TCCCGGTCGG CGTCGGCCTC GGTGTGCGGT CGCGGGAGCA GGCCGCCGAG ATCGGCGCGT ACGCCGACGG CGTGATCGTC GGATCGGCGC TGGTGTCGGC GCTCAAGGAC GGTGTGCCCG CGGTGCGCGC GCTGACCGAG GAACTAGCTG AGGGAGTCCG CCAGAGGGTG ACCGCGTGA
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Protein sequence | MSRLGGLFDA CRAERRAALI GYLPTGFPDV PASISAMTAL VESGCDIIEV GIPYSDPGMD GPVIAAATEA ALQGGVRVRD TLTAVEAISN AGGRAVVMTY WNPVLRWGID AFARDLAAAG GLGLITPDLI PEEADEWMAA SDAHDLDRIF LVAPASTPER LAKTVQATRG FVYAASTMGV TGARDAVSSA APELVARVKE VSDIPVGVGL GVRSREQAAE IGAYADGVIV GSALVSALKD GVPAVRALTE ELAEGVRQRV TA
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