| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mkms_3092 |
|---|
| Symbol | |
|---|
| ID | 4610927 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. KMS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008705 |
|---|
| Strand | - |
|---|
| Start bp | 3232440 |
|---|
| End bp | 3233363 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639792763 |
|---|
| Product | polar amino acid ABC transporter, inner membrane subunit |
|---|
| Protein accession | YP_939076 |
|---|
| Protein GI | 119869124 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.253474 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGATG CCGATTCGTC GCCGCGCACC GACGCCGCTC CCATCGATGC CGTTCCCCTG
CGACATCCCT GGCGGTGGGT GGCGGCGGTC GTCATCGTCG TCCTGGTCGG GCTGTTCCTC
TACGGCGCGG CGACCAACGA GGCCTACAGT TGGTCGACCT ACCGCAAATA CCTGTTCGAC
CAACGCATTT CCGAGGCGGC CTGGAACACC CTGCAGCTGA CCATCCTCTC GATGGTTCTC
GCGCTGGTAC TCGGGGTGCT CCTGGCCGTG ATGCGGCTGT CGCCCAACCC GGTGTTCAAA
TCGGTTGCCT GGGTGTACCT GTGGATCTTC CGCGGCACTC CCGTGTACGT GCAGTTGGTC
TTCTGGGGGC TGTTCCCGAC GCTGTACCAG AACATCAGGA TCGGCATACC GTTCGGTCCG
TCGTTCTTCG AGATGAACCT GCAGGGGCTG TCGATCAGCT TCACCCTGGC GATCATCGGC
CTGGGTCTCA ACGAGGCCGC GTACATGGCC GAGATCATCA GGGCGGGAAT CAGTTCCGTG
CCGGAAGGGC AGTCCGAGGC GTCCACGGCG CTGGGCATGT CGTGGACGAT GACGATGCGG
CGCACCGTCC TCCCGCAGGC GATGCGCGTC ATCATCCCAC CCACCGGCAA CGAGATCATC
AGCATGCTCA AGACCACGTC GCTGGTCACG GCCGTGCCGT ACAGCATGGA GCTCTACGGG
CGGGCGCGCG ACATCGCCGG GGTCATCTTC CAGCCCATCC CGCTGCTCAT GGTCGCCGCC
ACGTGGTACC TCGCGATCAC CAGCGTGCTG ATGGTCGGTC AGTACTACCT CGAGCGCTAT
TTCTCCCGCG GCGCCTCGCG CAAGCTGACC ACCAAACAGC TCGAGGCGCT CGCCAAGGCG
CAGAGAGTGG GTGAACATCC GTGA
|
|---|
| Protein sequence | MTDADSSPRT DAAPIDAVPL RHPWRWVAAV VIVVLVGLFL YGAATNEAYS WSTYRKYLFD
QRISEAAWNT LQLTILSMVL ALVLGVLLAV MRLSPNPVFK SVAWVYLWIF RGTPVYVQLV
FWGLFPTLYQ NIRIGIPFGP SFFEMNLQGL SISFTLAIIG LGLNEAAYMA EIIRAGISSV
PEGQSEASTA LGMSWTMTMR RTVLPQAMRV IIPPTGNEII SMLKTTSLVT AVPYSMELYG
RARDIAGVIF QPIPLLMVAA TWYLAITSVL MVGQYYLERY FSRGASRKLT TKQLEALAKA
QRVGEHP
|
|---|
| |