Gene Mkms_3046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_3046 
Symbol 
ID4610880 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp3187732 
End bp3189129 
Gene Length1398 bp 
Protein Length465 aa 
Translation table11 
GC content71% 
IMG OID639792716 
Productmajor facilitator superfamily transporter 
Protein accessionYP_939030 
Protein GI119869078 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.958092 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTGACA CCTCGCGCGT CTCGGTGGGC ACCTGGCGCG ACCTGCTGGG CCCGGCTCAC 
CTCGGTGCGT CGACGGTGCT GGCGGGCGGT GTCGCGCTGT ATGCGACCAA CGAGTTCCTC
ACCATCAGCC TGATGCCGAG CGCCGTCGCC GACATCGGTG GTCAGCGGTT CTACGCCTGG
GTGACGACGG TGTACCTGGT CGCCTCGGTG ATCGCCGCGA CGACCGTGCA CCCGCTCCTG
ATGCGCCTGG GGCCGCGGCA GGCGTACTGG TCGGGTCTGA GCGTGTTCGC GGCCGGCAGC
CTGGGCTGTG CACTCGCCCC GACGATGGAG TGGCTCCTCG TCGGCCGAAC GGTGCAGGGT
GGGGCCGGTG GCCTGCTCGC CGGTCTCGGT TACGCCGTGA TCAACACCGC GCTGCCGAGC
CGGTTGTGGA CGCGCGCATC GGCGTTGGTG TCGGCCATGT GGGGAGTCGG GACACTCGTC
GGCCCCGCCG CGGGTGGTCT GTTCGCCCAG TTCGGCAGTT GGCGTTGGGC GTTCGGCGTG
TTGGTCGGGC TCACCGTCGC GATGGGGGTG CTGGTGCCGT TCGCGCTTCC GGACCGGGTC
GATGGCACCG ACGCCGAGCG GCCCCGCCTG CGGATCCCGC TGTGGTCGCT GCTGTTGCTG
GGTGCGGCGG CGTTGGTGGT CAGCATGGCC GGAATCCCAC ACGATGTGCG GGCCACGGCG
GGACTGCTCC TCGCCGGCGT CGCCATCGTG ATGGTGTTCG TGGTCGTGGA CCGTCGCGCC
ACCGTTGCGG TGTTGCCGCC CAGCGCTTTC GGCCGTGGCC CCCTGAAGTG GATCTACGCG
ACGCTGGGCC TGCTGATGGC CGCGACGATG GTCGACATGT ACGTGCCGTT GTTCGGGCAG
CGTCTCGCCG GTATGACGCC TGTCGTCGCC GGGTTCTTCG GCGCGGTGCT CTCGGTCGGG
TGGACGGGCG GGGAGATCAC CAGCGCCTCG CTGAGCCGCG CGCGGGTGAT CGTGCGTACC
GTCGCGTGCG CGCCGCTCGT CATGGCCGCC GGTCTGACGC TCGGCATGTT CGCGCTGCGC
GACGAGATGT CGCCGGGCTG GGCTGCGCTG TGGGCGGTCG GGCTGCTCGT CACCGGTACC
GGCATCGGGA TCGCCTGGCC CCACCTGTCC GCATGGGCGA TGAGTCGCGT CGACGATCCG
GCCGAGGGGC CCGCGGCCGC CGCGGCGATC AACACGGTCC AACTCATCTG CGGAGCCTTC
GGCGCCGGCC TGGCGGGTGT CGTCGTCAAC CTCACCGACG CCGGCAACGC AACCGCGGCG
CGTTGGCTGT TCGCGGCGTT CGCGGGATTC GTCGCCGTCG GCGTCCTCGC GTCCACGCGA
AGCTGCCGAA CCCGTTGA
 
Protein sequence
MTDTSRVSVG TWRDLLGPAH LGASTVLAGG VALYATNEFL TISLMPSAVA DIGGQRFYAW 
VTTVYLVASV IAATTVHPLL MRLGPRQAYW SGLSVFAAGS LGCALAPTME WLLVGRTVQG
GAGGLLAGLG YAVINTALPS RLWTRASALV SAMWGVGTLV GPAAGGLFAQ FGSWRWAFGV
LVGLTVAMGV LVPFALPDRV DGTDAERPRL RIPLWSLLLL GAAALVVSMA GIPHDVRATA
GLLLAGVAIV MVFVVVDRRA TVAVLPPSAF GRGPLKWIYA TLGLLMAATM VDMYVPLFGQ
RLAGMTPVVA GFFGAVLSVG WTGGEITSAS LSRARVIVRT VACAPLVMAA GLTLGMFALR
DEMSPGWAAL WAVGLLVTGT GIGIAWPHLS AWAMSRVDDP AEGPAAAAAI NTVQLICGAF
GAGLAGVVVN LTDAGNATAA RWLFAAFAGF VAVGVLASTR SCRTR