Gene Mkms_3008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_3008 
Symbol 
ID4610841 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp3146502 
End bp3147389 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content71% 
IMG OID639792677 
Productalpha/beta hydrolase fold 
Protein accessionYP_938992 
Protein GI119869040 
COG category[I] Lipid transport and metabolism 
COG ID[COG2267] Lysophospholipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.792567 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.417001 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGAGC GGGTCGAGTT CGCCGTCGAC GGGACGTCCG CGGTCGGGTA CCTGTCGGGT 
GTCGGCAGGG GCGGCCCACG GCCGTGTGTG GTGATGTGCC CGGGTTTCGG CGGCACCCAG
GACACCCCGG CGCTGGTCGC CACCGCCGAC GACTTCGTGC GCGGCGGATA CGCGGTGCTG
ACGTTCGACT ACCGCAACTT CGGTGAGAGT GGCGGCACGC CACGTCAACT CGCCGACATC
GAAGGTCAGC TCGACGACAT CGCCGCCGCC GTCGCCCGGG TTCGGCAGAT CCCGGGCGTG
GACGCCGACC GGATCGTGTT GTGGGGCACG TCGCTCGGCG GCGCCCACGC GGTGGTGGCG
ACGTCGCGCG ACCCACGCAT CGCCGCGGCG GTCGCACAGA TCCCCTTCAA CGGATTCCCC
AAGAAGGTCG AGGGTCGGTC GCGCGCGGCC ACGTTGCGGC TGCTCGCCGC GATGACGGTC
GATGCGGTCC GCGGCCTGTT GCGCTTACCG CCGGCCTACA TCAAGGCCGT CGGCGGCCCG
GGCGAACTCG CCGTGATGGC GAGCGTCGAG GCGCTCCAGA CGATTAGAGG TCTGTCGAGC
AGGAACTGGC GCAACGAGGT GGCTCCGCGC GCACTGTTCG ACATGATGCG GTACCGCCCC
GCCGAGTCGG CCGGTGACGT CGCCGTCCCC GTACTGGTCT GCGCCGGGGA CCGCGACCGA
GAGGTGCCAC CCGAGCTCAC CGCGGCGTTG GCTCACGCGA TCCCGCAGGG GGAGTTGCGC
ACCTACCCCC ACCCGCATTT CGCCTTCTAC CAGGCCGACA TCCGCAGGCA GGTGACCGCC
GATCAGCTGG CCTTCCTCCA CCGGGTGGTC GGTCCCGGCC CGCGGTAG
 
Protein sequence
MTERVEFAVD GTSAVGYLSG VGRGGPRPCV VMCPGFGGTQ DTPALVATAD DFVRGGYAVL 
TFDYRNFGES GGTPRQLADI EGQLDDIAAA VARVRQIPGV DADRIVLWGT SLGGAHAVVA
TSRDPRIAAA VAQIPFNGFP KKVEGRSRAA TLRLLAAMTV DAVRGLLRLP PAYIKAVGGP
GELAVMASVE ALQTIRGLSS RNWRNEVAPR ALFDMMRYRP AESAGDVAVP VLVCAGDRDR
EVPPELTAAL AHAIPQGELR TYPHPHFAFY QADIRRQVTA DQLAFLHRVV GPGPR