| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mkms_2465 |
|---|
| Symbol | |
|---|
| ID | 4616025 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. KMS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008705 |
|---|
| Strand | - |
|---|
| Start bp | 2588150 |
|---|
| End bp | 2589481 |
|---|
| Gene Length | 1332 bp |
|---|
| Protein Length | 443 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639792133 |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_938452 |
|---|
| Protein GI | 119868500 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.270585 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATCC CGAAGCTCGG CCGGCGCCCA GCGCGGCGGA AAGCCACGCG CTGGATGCCG
GCACTGGCCA TGACCGCAGG ACTCGCTTTG GCCGGCTGCG CCGGATCCGG TGGCTCCGGC
GACGAGCAGA GCTCGTCGGG GTTGGGGGAC ATCCCGACCG ACACCAACGC AACCGTGCGG
GTGCTCATGG AGAACGTGCC CGACACCGAC ATCGTGCAGG GCATGGTCGG ACAGTTCAAC
GAGAAGTACC CCGACATCAA GGTCCAGATC GAGACCATGA CGTTCGACCA GATGCGTGAC
CGCCTGGTGT CGTCGTTCCA GTCGGCCGAA CCCGCCTACG ACCTGATCGT CGTCGACAAC
CCGTGGATGG ACGATTTCGC CGCCGCGGGC TTCCTCGAGC CGCTGAACGA CCGGATCTCC
TCGACCCCCG ACTACCAGCC GGACGACTTC TTCCCGTCGC TGACCGACAT CACCGACGTC
GACGGCACGA CCTACGGGGT GCCGTTCTAC AACTACGCAC TGGGCTACAT CTACAACAAG
CCGGATCTGC AGGCCGCGAA CCTGCAGGTG CCGACCGACC TCGACGCGCT GGTGTCGACG
TCGCAGCGGC TCAAGGCGGG CGACCGCGCC GGTATCGCCA TGCAGCCGCA GCGCGGGTAC
AAGATCTTCG AGGAATGGGC GAACTGGCTG TTCGCCGCGG GCGGGTCGAT CTACGACGCG
GACGGTAAGC CGACGCTGAA CACCGAGCAG GCCGCCCGCG CCCTGGACGC CTACATCGAG
ACCTACCGCA CCGCGGCCCC GGCCAACAGC CTGAACTGGG GCTTCGACGA GGCCTTCCGC
TCGGTCTCCG GCGGCAACGC CGCCTCGATG ATCGGCTACA ACTGGAACCT GCCCGCGCTC
AACGACCCCG CCGGGGCGTC GGGTGCGCGC GCCGGACAGT TCGCGTTGGC GCCGATTCCC
GGCGGCAAGT CCGCGCTGGG CCTGTGGAGC TGGGCGATCC CGGCGAACTC GGCGGCTCCG
GACGCGGCCT GGGCGTTCAC GTCCTGGATC ACCTCACCCG CCGTCGACGC CCAGCGCGTC
GCCGAGGGCG GTGCGGTGAC CCGCAAGGGT TCGCTGACCG ATCCAAAGGT GCTGGCCGAC
GGGTACGGCG AGGAGTACTA CCGCGTCGTC GGTGAGATCC TGGCCGACGC GGCCCCGCTC
TCCCAGGGCC GCGGTGGTGA GGAGATGATC CAGGCCGTGG GAACCGAGCT CAACGACGCG
GCGGCGGGCA ACAAGAGCGT GGCCGACGCA CTGCGCGACG CCCAGGCGGC CGCAGAGCGA
ATCCAGCAGT GA
|
|---|
| Protein sequence | MKIPKLGRRP ARRKATRWMP ALAMTAGLAL AGCAGSGGSG DEQSSSGLGD IPTDTNATVR
VLMENVPDTD IVQGMVGQFN EKYPDIKVQI ETMTFDQMRD RLVSSFQSAE PAYDLIVVDN
PWMDDFAAAG FLEPLNDRIS STPDYQPDDF FPSLTDITDV DGTTYGVPFY NYALGYIYNK
PDLQAANLQV PTDLDALVST SQRLKAGDRA GIAMQPQRGY KIFEEWANWL FAAGGSIYDA
DGKPTLNTEQ AARALDAYIE TYRTAAPANS LNWGFDEAFR SVSGGNAASM IGYNWNLPAL
NDPAGASGAR AGQFALAPIP GGKSALGLWS WAIPANSAAP DAAWAFTSWI TSPAVDAQRV
AEGGAVTRKG SLTDPKVLAD GYGEEYYRVV GEILADAAPL SQGRGGEEMI QAVGTELNDA
AAGNKSVADA LRDAQAAAER IQQ
|
|---|
| |