Gene Mkms_2396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_2396 
SymbolaroE 
ID4613219 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp2514401 
End bp2515231 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content74% 
IMG OID639792065 
Productshikimate 5-dehydrogenase 
Protein accessionYP_938384 
Protein GI119868432 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0169] Shikimate 5-dehydrogenase 
TIGRFAM ID[TIGR00507] shikimate 5-dehydrogenase
[TIGR01809] shikimate-5-dehydrogenase, fungal AROM-type 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.172866 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCAGATA GGCGGCCCGC CGCCGTGCCC GACAGCGCGC GTAAGGCGGC CGTCCTCGGC 
TCACCGATCG CGCACTCGCG GTCACCGCAG TTGCACCTCG CGGCCTACCG TGCGCTCGGC
CTGACCGACT GGACCTACGA ACGCATCGAG TGCACCGCCG AACAACTGCC CGGGCTGGTC
GGCGGATTCG GCCCGGAGTG GGTCGGGGTC TCGGTGACGA TGCCGGGCAA ATTCGCCGCG
CTGCGCTTCG CCGACGAACG CACCGAACGC GCGGAGTTGG TCGGGTCGGC CAACACCCTG
GTCCGCACAC CGAACGGGTG GCGGGCCGAC AACACCGACG TCGACGGTGT GGCCGGGGCG
CTGGGAAACG TCGACGGGCC GGGGATCGTC GTGGGCTCCG GCGGGACCGC TCCGGCCGCC
GTGGTGGCGC TCGCCGGACT CGGCGCCACC CGTCTCACGA TCGCCGCCCG CAACGCGGAC
AAGGCGGCGT CGCTGGTCGA CCTGGCGCAC CGCCTCGGCG TCACCGCGCG GTGGTGCGAC
CTCGACGACC CGGACCTGAC CGCACTCGCG GCGGCCGCCG GTGCGGTCGT CAGCACCGTC
CCCGCCGACG TGGCGCAGCG GTATGCGGCG ACGTTCGCGG GCACGCCGGT CCTGCTCGAC
GCGATCTACG ATCCGTGGCC GACACCGCTG GCGGCGGCGG TGCAGGCCGC GGGCGGCCGC
GTGATCGGCG GGCTGCAGAT GCTGCTGCAC CAGGCCTTCG CGCAGGTCGA ACAGTTCACC
GGCCTGCCGG CGCCGAAAGA GGCGATGAGG GCGGCGCTGC AGACCGCTTA G
 
Protein sequence
MPDRRPAAVP DSARKAAVLG SPIAHSRSPQ LHLAAYRALG LTDWTYERIE CTAEQLPGLV 
GGFGPEWVGV SVTMPGKFAA LRFADERTER AELVGSANTL VRTPNGWRAD NTDVDGVAGA
LGNVDGPGIV VGSGGTAPAA VVALAGLGAT RLTIAARNAD KAASLVDLAH RLGVTARWCD
LDDPDLTALA AAAGAVVSTV PADVAQRYAA TFAGTPVLLD AIYDPWPTPL AAAVQAAGGR
VIGGLQMLLH QAFAQVEQFT GLPAPKEAMR AALQTA