| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mkms_2336 |
|---|
| Symbol | |
|---|
| ID | 4613338 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. KMS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008705 |
|---|
| Strand | - |
|---|
| Start bp | 2448182 |
|---|
| End bp | 2449285 |
|---|
| Gene Length | 1104 bp |
|---|
| Protein Length | 367 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639792005 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_938324 |
|---|
| Protein GI | 119868372 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
|---|
| TIGRFAM ID | [TIGR03408] urea ABC transporter, permease protein UrtC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.112184 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.257674 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGACCT TCGTGGGACG CTGGCAGACG TGGGCGGGGT TCGGCGTGGC GGCGCTGCTG
CTCTTCGCGG TGGCGCCCGC GGTCCTGTCC GACTTCCGGC TCGGCCTGCT CGGCAAATTC
CTCTGCTTCG CGATCGTCGC GGTCGGCATC GGCCTGGCCT GGGGCCGGGG CGGCATGCTG
GTCCTGGGGC AGGGGGTGTT CTTCGGCCTC GGCGGCTACA TGATGGGCAT GCACCTCAAG
ATCTCCGATG CGCAGCTGCG CGGAGACGAT GTGCCGGACT TCATGCAGAT CGCCGGTGTG
CGCGAATTGC CCGGCTACTG GGCGCCGTTC GCCTCCCCCG CCTTCACGCT GCTGGCGATC
GTCGTGATCC CGACCGGCAT TGCCGCGGTG CTGGGTTTCG GGGTGTTCAA GCGCCGGGTC
AAGGGCGCCT ACTTCGCGAT CCTGTCCCAG GCGCTGGCGG CCGCGCTGGC CATCCTGCTG
GTCGGCCAGA CCGGGCTGGG GGGAAGCAAC GGGCTGACGA ACTTCCGGAC GTTCTTCGGG
TTCGCGCTCA ACGATCCGGT CAACAAGCAG ATGCTCTACT TCATCGCCGC GGCGGTGCTG
CTGGTCGTGG TCGCGGTGGT GCGGCAACTG ATGCAGAGCC GCTACGGCGA ACTGCTCGTG
GCAGTGCGCG ACGGTGAGGA GCGGGTGCGC TTCCTCGGCT ACGACCCGGC CAACATCAAG
GTCGTCGCCT ACACGGTGGC CGCGCTGTGC GCCAGCATCG CCGGAGCGCT GTTCGCCCCG
ATCGTCGGAT TCATGGCGCC GTCTCAGGTG GGCATCCTGC CGTCCATCGC CTTCCTCATC
GGCGTCGCGA TCGGTGGCCG CACCACCCTG CTCGGACCGG TGCTCGGCGC CATCGGCGTC
GCGTGGGCGC AGACCCTGTT CTCCGAACGG TTCCCGTCGG AGTGGATCTA CGCCCAGGGC
CTGCTGTTCA TCGTCGTCGT CGGGTTCTTC CCCGCCGGGC TGGCCGGGCT CGGTGTGCTG
CTCAAACGAC GGCGTAGGAA GAAGTCGGAA CCCGTACCCG CACAACCCGA TCCGCAACCC
GAGAAGGTGG GGGCGCCCAC ATGA
|
|---|
| Protein sequence | MRTFVGRWQT WAGFGVAALL LFAVAPAVLS DFRLGLLGKF LCFAIVAVGI GLAWGRGGML
VLGQGVFFGL GGYMMGMHLK ISDAQLRGDD VPDFMQIAGV RELPGYWAPF ASPAFTLLAI
VVIPTGIAAV LGFGVFKRRV KGAYFAILSQ ALAAALAILL VGQTGLGGSN GLTNFRTFFG
FALNDPVNKQ MLYFIAAAVL LVVVAVVRQL MQSRYGELLV AVRDGEERVR FLGYDPANIK
VVAYTVAALC ASIAGALFAP IVGFMAPSQV GILPSIAFLI GVAIGGRTTL LGPVLGAIGV
AWAQTLFSER FPSEWIYAQG LLFIVVVGFF PAGLAGLGVL LKRRRRKKSE PVPAQPDPQP
EKVGAPT
|
|---|
| |