Gene Mkms_2301 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_2301 
Symbol 
ID4613303 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp2408493 
End bp2409188 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content71% 
IMG OID639791970 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_938289 
Protein GI119868337 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.488916 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCC CCGTCGCCGT GGTGACCGGT GCGGGCAGCG GCATCGGCGC CGAGATCGCG 
CAGAACCTCC AGGTCGGCGG CTGGAAGGTG GCCTCGATCT CTCGGGAACC CGCACCCGCG
ATGGACAAGT GGCTGATCGC CGACGTCGCC GAGGAGCGTG AGATCGCCGA CGCCGTCGCC
GAGATCGAGA ACACCTTCGG GCGCATCGAC GCGGCCGTGG TGTGCGCCGG ACACTACGAG
GAGACCCCCG CCCTCGAGAT CACCCAGGCC GCCTGGGAAC GGATGCTGCG GGTGCACGTG
GGCGGGCTGG CGCACATCTG CCGCGCGGTC CTACCGGCCA TGCGGCGACG GGGGAGTGGC
CGCATCGTCG GCATCGCCTC CGAACGCGCC ATCGGCGGCG GGAGCAACGA CGCGCACTAC
GCGGCCGCCA AGGGTGCCGC GCTGAGCCTG CTGCGCAGCA TCGCCGTCGA GGTGGCCGCC
GACGGGATCC TGGTCAACGC GGTCGCGCCC GGGCCGTGCG ACACGCCGCT GCTACCACCC
GATTCATGGG AACGGGCCGA GGGGTTCACC TCCGGTCTGC CCGCGCGGCG CATCGCCCAA
CCGCGCGAAG TGGCCGAACT CGTCCAGGCA CTGCTGGAGG AGGACCTGTT CCTGTGCGGA
GAAGTGTTGT CGGTCAACAG CGGAACGGTC ATCTGA
 
Protein sequence
MTAPVAVVTG AGSGIGAEIA QNLQVGGWKV ASISREPAPA MDKWLIADVA EEREIADAVA 
EIENTFGRID AAVVCAGHYE ETPALEITQA AWERMLRVHV GGLAHICRAV LPAMRRRGSG
RIVGIASERA IGGGSNDAHY AAAKGAALSL LRSIAVEVAA DGILVNAVAP GPCDTPLLPP
DSWERAEGFT SGLPARRIAQ PREVAELVQA LLEEDLFLCG EVLSVNSGTV I