| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mkms_2261 |
|---|
| Symbol | |
|---|
| ID | 4613438 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. KMS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008705 |
|---|
| Strand | + |
|---|
| Start bp | 2373338 |
|---|
| End bp | 2375665 |
|---|
| Gene Length | 2328 bp |
|---|
| Protein Length | 775 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639791926 |
|---|
| Product | diguanylate cyclase/phosphodiesterase |
|---|
| Protein accession | YP_938249 |
|---|
| Protein GI | 119868297 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
|---|
| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTGCGA GGCCCCGAGA AGCGGTCGTG ATCGCCGGGT CCGGTGTCGC CGCTGTGTTG
TTGACGATCT GGTTGGTCGG CGAGTTCCCC GGCGCGGCGG CGGCCGACAA CGTCGGCGTG
GCCGTGTTCG CCGGCTACGC GGTGGTGTGC GCCGTGCTGG CGGCGCGCGC CGCGTCCGGG
CGGATGCGCA ACGTCTGGGT CTGCTTCGCC GTCGCCTTCG GCGGATGGAC GGCAGGCGAG
GTCCTCTTCG GGTATCAGGA TCTGGTGCTG GGGCATACGA CGTTCCCCTC GGCCGCGGAT
TTCGGGTTCA TCCTGTGTCC GATCTTCAGC TGTCTGGCCC TGGTGCAGTG GCCCGGCGGG
GTCGCGGGAC GCTACCGGGT GCGCCTGCTG CTCGACGGGC TGGTCTTCGC ATTGTCGCTG
TTCCTGCTCG CGTGGGTGTT GGTGCTGCGC GGCGTCTACG AGAGCTTCCG TGACGACAAA
GTGGCGCTCG GCCTGGCGCT GGCGTACCCG CTCCTCGACC TGATGGTGCT CGCCGTAGCC
GGGCTGGTCC TGGTCCGCGC GGTTACCTGG CGCCTGCCAC TGGTCCTGCT CACGGCGTCC
GTCGTCCTGC TCACCGTGTC CGACATCGCC TTCGCGTGGC TGACCACGCA GGGAACCTAT
GCCGCCGTCT TTCCCATCGA CGTGGGCTGG GTGGCCGGGA CCGTGTTCTT CGGCGCCGCG
GCGCTGACGA GCCGCGGCAT GGACGCCACC CCGGACACCA CCACGCGGTT GCCCACCAGC
GTCTCCCTGT GGTTGCCGTA TCTGCCGCTC CTGGTCGGCG GCACGGTCGC GACGGTCGTG
GTGCTCGACG GAGTCCTGGC CGTCACCGTG ATCTCCGTGA TCGTCGCCAT CTGCCTGCGC
CAGTTCGTCG CGTCGTGGGA GAACCGCAGG CTCATGCGGA TGGTGACCGA TCAGGCGCTG
CGCGATCCGC TGACCGGTTT GGCAAACCTC GCGCTGTTCA ACGACCGGCT CGCACACGCG
GTCCAGTTAC GGGCACGCGA CGCGGGCGCC GTCGCGGTGC TGTCACTGGA CCTCAACGAC
TTCAAGGTCG TCAACGACAG CCTCGGCCAC TCGGCGGGCA ACGAACTGCT CACCCAGGTC
GCCGACCGCC TGGTGAAGTG CGTGCGGGCC GGTGACACCG TGGCGCGAGT CGGGGGCGAC
GAGTTCGCCG TGCTGATCGA GGACCGTGTC GACCACTCGC TGGCGATCGC GCACCGCATC
ATGGAAGCCT TCGACTCACC GTTCCACGTC GAGGGCGAGA GCCTGCTGAT GCGGCCCAGC
GTCGGCCTGG CCGTCGCCGC ACCGGACGAC GAACTCGAAC CGTCGGGTGA GCAACTCTTC
AGGCGTGCGG ACGCGGCGAT GTACGCCGCG AAGCGGTCCC GCACCGAGGG TGTCCACGTG
TTCAGCCCGG AGATGACGCC GGCGAACACC GAACAATCGG CGCTGCTGCG GGTTTCGGAC
CACGGCGCCC GAGGGGGTGG TGTGTCGGCG GTCCAGCTGC TCGGCGAGCT GCGCCAGGCC
ATCGACCGTC GCGAACTGGA CGTGGTGTAT CAGCCCAAAT ACCACCTGGC GACGTCCGAA
CTCGCCGGCG TGGAGGCGTT GGTCCGGTGG CCGCACCCCG TGCACGGCAC CCTCAACCCG
GGCGACTTCC TGCCGATGGT GCGCAGGCAC GGCCTGATGG GGGCGCTCAC CGACCTGGTG
GTCGACAAGG CGCTCGACCA CGCCGCCGGA TGGGTGGCGA CCGGCACCCC GGTGCCCGTC
GCGGTGAACC TGTTCGCGGC GACCATGGCC GACACCGACC TGCCGGACAA GATCGTCGCG
GCACTCGAGT CGCGCGGGCT GGCGCCCGCC GGACTGACCG TCGAGATCAC CGAGGACCTG
ATCCTGCCCG ACTTCAAGCG GACGTGCGCG GTGTTGCAGG AGCTACGCCG CCGTGGCGTG
CGGGTGGCCA TCGACGATTT CGGCAGCGGG TACTCGGCGC TGAGCTATCT GCGGGAACTG
CCGATCGACG AGGTCAAACT GGACCGCCGG TTCATCGGTC CGATCATCTG GGACCCGAGG
GCCGGCGAGG TGGTCCGCGC GGTGGTCAGC CTCGCGCAGA CCCTGGGACT GACGACGGTG
GCGGAGGGCG TCGAGAACGC GGAGACCGCC GAACGCCTCC GCGATTACGG GTGCGATGTG
GCGCAGGGTT TCCACTACAG CCCGCCACTG AGCGCGCCCG GGGTCACGGC GCTGCTGCGG
GCGGAGACTA TCCGCCCGCC GGCACCAGCC GCAGTGAGAT GGAATTGA
|
|---|
| Protein sequence | MRARPREAVV IAGSGVAAVL LTIWLVGEFP GAAAADNVGV AVFAGYAVVC AVLAARAASG
RMRNVWVCFA VAFGGWTAGE VLFGYQDLVL GHTTFPSAAD FGFILCPIFS CLALVQWPGG
VAGRYRVRLL LDGLVFALSL FLLAWVLVLR GVYESFRDDK VALGLALAYP LLDLMVLAVA
GLVLVRAVTW RLPLVLLTAS VVLLTVSDIA FAWLTTQGTY AAVFPIDVGW VAGTVFFGAA
ALTSRGMDAT PDTTTRLPTS VSLWLPYLPL LVGGTVATVV VLDGVLAVTV ISVIVAICLR
QFVASWENRR LMRMVTDQAL RDPLTGLANL ALFNDRLAHA VQLRARDAGA VAVLSLDLND
FKVVNDSLGH SAGNELLTQV ADRLVKCVRA GDTVARVGGD EFAVLIEDRV DHSLAIAHRI
MEAFDSPFHV EGESLLMRPS VGLAVAAPDD ELEPSGEQLF RRADAAMYAA KRSRTEGVHV
FSPEMTPANT EQSALLRVSD HGARGGGVSA VQLLGELRQA IDRRELDVVY QPKYHLATSE
LAGVEALVRW PHPVHGTLNP GDFLPMVRRH GLMGALTDLV VDKALDHAAG WVATGTPVPV
AVNLFAATMA DTDLPDKIVA ALESRGLAPA GLTVEITEDL ILPDFKRTCA VLQELRRRGV
RVAIDDFGSG YSALSYLREL PIDEVKLDRR FIGPIIWDPR AGEVVRAVVS LAQTLGLTTV
AEGVENAETA ERLRDYGCDV AQGFHYSPPL SAPGVTALLR AETIRPPAPA AVRWN
|
|---|
| |