Gene Mkms_2200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_2200 
Symbol 
ID4613377 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp2313949 
End bp2314629 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content65% 
IMG OID639791865 
Productpolar amino acid ABC transporter, inner membrane subunit 
Protein accessionYP_938188 
Protein GI119868236 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0765] ABC-type amino acid transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.104436 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0317126 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAGATAT TCACCGAGTA CCGCGCGCAG ATCTTCGAGG CGTTCTGGAC CACCATCCAG 
CTCACGGTCT ACTCCGCGGT CGGAGCACTC ATCCTGGGCA CGGTGCTGGC CGGCATGCGG
CTGTCGCCGG TGCCGATGCT GTCCTGGCTG GGCACCGCCT ACGTCAACGT CATCCGCAAC
ACGCCGTTGA CGCTGATCAT CCTGTTCTGC TCGTTCGGGG TGTCCCAGAC CCTCGGGATC
ACGCTGGTCG ACCCGCAGTC GAGCACCTCC ATCGAGGACA GCAACTTCCG GTTGGCGGTA
CTCGGGCTGA CCGTGTACAC CGCGTCGTTC GTATGCGAGA CGGTGCGCTC GGGCGTCAAC
ACGGTGCCGC TGGGCCAGGC CGAGGCGGCT CGCTCCCTGG GTCTGACTTT CAGCCAGAAT
CTGCGAATGA TCCTGCTGCC GCAGGCTTTT CGTTCCGTGG TCATCCCGCT GGGCTCGGTG
CTGATCGCGC TGACGAAGAA CACGACGATC GCCTCGGCGA TCGGCGTGGC CGAGGCGGCG
CTGCTGATGA AGGAGATGAT CGAGAACACC GCGGCACTGC TCGTGGTCGG GTCGATCTTC
GCCCTGGGGT TCATCATCCT GACGTTGCCG CTGGGGCTGG TTTTCGGATG GCTCGGGAAA
CGTCTGGCGG TGGCCCGGTG A
 
Protein sequence
MEIFTEYRAQ IFEAFWTTIQ LTVYSAVGAL ILGTVLAGMR LSPVPMLSWL GTAYVNVIRN 
TPLTLIILFC SFGVSQTLGI TLVDPQSSTS IEDSNFRLAV LGLTVYTASF VCETVRSGVN
TVPLGQAEAA RSLGLTFSQN LRMILLPQAF RSVVIPLGSV LIALTKNTTI ASAIGVAEAA
LLMKEMIENT AALLVVGSIF ALGFIILTLP LGLVFGWLGK RLAVAR