Gene Mkms_2162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_2162 
Symbol 
ID4613521 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp2282238 
End bp2283149 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content71% 
IMG OID639791827 
Productdihydrodipicolinate synthase 
Protein accessionYP_938150 
Protein GI119868198 
COG category[E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase 
TIGRFAM ID[TIGR00674] dihydrodipicolinate synthase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.3452 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.49306 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCACCCG TGAGTATCAG CGGATTCGAC GTGACGGCCC GGTTGGGCAC CGTGCTCACC 
GCGATGGTCA CTCCGTTCAA GCCCGACGGC ACCCTCGACA CGGATGCCGC CGCCCGTCTG
GCGAACCACC TCGTCGATTC CGGCTGCGAC GGTCTGGTGC TGTCCGGCAC CACCGGTGAG
TCCCCGACCA CCACCGATGA CGAGAAGCTC ACGCTGCTGC GCACCGTGCT CGAAGCGGTC
GGCGACCGCG CCCGTGTCGT CGCCGGCGCG GGCACCTACG ACACCGCCCA CAGCGTGCAC
CTGGCCAAGT CGTGTGCGGC CGAGGGCGCG CACGGTCTGC TCGTCGTGAC CCCGTACTAC
TCGCGCCCGC CGCAGGCCGG CCTGCTCGCG CACTTCACCG CGGTCGCCGA CGCAACCGAC
CTGCCCGTCG TGCTGTACGA CATCCCGCCG CGGTCGGTCG TCCCGATCGC CTGGGACACC
ATCCGCACGC TCGCCGAGCA CCCGAACATC GTCGCGATCA AGGATGCCAA GGGCGACCTG
CACGGCGGCG GTCAGATCAT CGCCGAGACC GGTCTGGCGT ACTACTCCGG CGACGACGCG
CTGAACCTGC CGTGGCTGGC GATGGGCGCC GTCGGCTTCA TCAGCGTGTG GGGCCACTTC
GCGGCCAGCC AGCTGCGAGA GATGCTGTCG GCGTTCAACT CCGGCGACAT CGCGACCGCG
CGCAAGATCA GCGTGGCGCT CGGCCCGCTG AGTGACGCGC AGGCGCGTCT GGGTGGCGTG
ACGATGTCCA AGGCCGGGCT GGGCCTGCTG GGCTTCGACG TCGGGCTGCC GCGGCTGCCG
CAGATTCCGC CGACGCCCGA CGAGCTGACG GCGCTGGCCG AGGACATGCG CGCCGCGGCG
GTGCTGCGGT GA
 
Protein sequence
MSPVSISGFD VTARLGTVLT AMVTPFKPDG TLDTDAAARL ANHLVDSGCD GLVLSGTTGE 
SPTTTDDEKL TLLRTVLEAV GDRARVVAGA GTYDTAHSVH LAKSCAAEGA HGLLVVTPYY
SRPPQAGLLA HFTAVADATD LPVVLYDIPP RSVVPIAWDT IRTLAEHPNI VAIKDAKGDL
HGGGQIIAET GLAYYSGDDA LNLPWLAMGA VGFISVWGHF AASQLREMLS AFNSGDIATA
RKISVALGPL SDAQARLGGV TMSKAGLGLL GFDVGLPRLP QIPPTPDELT ALAEDMRAAA
VLR