| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mkms_1996 |
|---|
| Symbol | |
|---|
| ID | 4613562 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. KMS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008705 |
|---|
| Strand | + |
|---|
| Start bp | 2115384 |
|---|
| End bp | 2116274 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639791662 |
|---|
| Product | formamidopyrimidine-DNA glycosylase |
|---|
| Protein accession | YP_937985 |
|---|
| Protein GI | 119868033 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0266] Formamidopyrimidine-DNA glycosylase |
|---|
| TIGRFAM ID | [TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0991717 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.409314 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAGAAC TCCCCGAGGT CGAGGTCGTC CGGCGCGGTC TGGACGCCCA CGTCACCGGT
AAGGCGATCA CCGCCGTGCG GGTGCACCAT CCGCGGGCGG TGCGTCGCCA CGAAGCGGGG
CCCGCCGATC TGACGGCGCG GCTGCTCGGT ATGCGGATCA CCGGCACCGG CAGGCGCGGC
AAGTATCTGT GGCTCACCCT GGACGACGGC GATGAGCCGC TTGCGCGAAG AGCGGAAAGC
AGCGTGGCGC TGGTGGTGCA CCTCGGGATG AGCGGGCAGA TGCTGCTCGG GCCCATCCCG
AAAGAGGACC ACCTGCGCAT CGCCGCGCTG TTCGACGACG GGACCGCGCT GAGCTTCGTC
GACCAGCGGA CCTTCGGCGG CTGGCTGCTC GCCGACCTGG TGACCGTCGA CGGCACCGAC
GTGCCGGTGC CGGTCGCGCA CGTCGCCCGC GACCCGCTGG ATCCGCGGTT CGACCGCGAT
GCGGTGGTAA AGGTGTTGCG CGGCAAGCAT TCCGAGATCA AACGCCAGTT GCTCGACCAG
ACCGTCGTAT CGGGGATCGG CAACATCTAC GCCGACGAGG CGCTGTGGCG GGCCAAGGTC
AACGGGGCCC GGCTGGCCGA GTCGCTGACC AAGCCCAAGC TCGCCGAGAT CCTCGACCAC
GCGGCCGACG TCATGCGCGA CGCGCTCGGA CAGGGCGGCA CGTCGTTCGA CTCGCTCTAC
GTCAACGTCA ACGGCGAATC CGGATACTTC GACCGGTCGC TGGACGCCTA CGGCCGCGAG
GGTGAGCCGT GCCGGCGCTG CGGGGCGATC ATGCGCCGCG ACAAATTCAT GAACCGCTCG
TCGTTCTACT GCCCGCGCTG CCAGCCCCGC CCGCGGGTGC GCCGCGCCTG A
|
|---|
| Protein sequence | MPELPEVEVV RRGLDAHVTG KAITAVRVHH PRAVRRHEAG PADLTARLLG MRITGTGRRG
KYLWLTLDDG DEPLARRAES SVALVVHLGM SGQMLLGPIP KEDHLRIAAL FDDGTALSFV
DQRTFGGWLL ADLVTVDGTD VPVPVAHVAR DPLDPRFDRD AVVKVLRGKH SEIKRQLLDQ
TVVSGIGNIY ADEALWRAKV NGARLAESLT KPKLAEILDH AADVMRDALG QGGTSFDSLY
VNVNGESGYF DRSLDAYGRE GEPCRRCGAI MRRDKFMNRS SFYCPRCQPR PRVRRA
|
|---|
| |