Gene Mkms_1955 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_1955 
Symbol 
ID4613701 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp2072646 
End bp2074121 
Gene Length1476 bp 
Protein Length491 aa 
Translation table11 
GC content73% 
IMG OID639791619 
Producthypothetical protein 
Protein accessionYP_937944 
Protein GI119867992 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1233] Phytoene dehydrogenase and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.689507 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGGGG CGGGCAGGAG CGCAGCGACC GGGGAGGTCA TCGGAGTGGA CGTCACTGTC 
GTCGGTAGCG GCCCCAACGG CCTGGCCGCC GCGGTCATCT GCGCCCGTGC GGGTCTGTCG
GTGCGGGTGA TCGAGGGTCA GCCCACGCCG GGCGGCGGTG CGCGCAGCGC TGCCGACCCC
GAGTTCCCGG ACGTTCTGCA CGACGTGTGC TCGGCGGTGC ATCCGCTGTC CGTGGCGTCG
CCGTTTTTCG CGGAGTTCGA TCTCGCGGCG CGCGGCGTGG ACCTGATCTC GCCGGAGGTG
TCCTACGCCA ACCCGCTGCC CGGCCGGCCG GCGGCCGTCG CGTACCGGTC GCTGGACCGG
ACGTGCGCCG AACTCGACCA CGGTGAGTCG TGGCGGCGGT TGTTCGGGCC GTTGGTCGAG
CACGTCGACG GTGTGCTCGG CTTCTTCCTC GGCGACAAAC GGTCGCTGCC GCCGGATCTC
CCGACGACGG TGCGCACCGG CCTGCGGGTG CTGGCCCAGG GCAGCCCGTT GTGGGGGTCG
CTGCGGGGTG AGGACGCCAG GGCGCTGTTC ACCGGTGTCG GCGTACACGC CATCAAGGCC
ATTCCCTCCC CGGTGAACAG CGGTGCGGGC CTGATGCTCG GCACGGTCGC GCACACCGCG
GGGTGGCCGG TCCCCGTCGG GGGCACGCAA CGGATCTCCG ATGCGCTGAT CGCCGATCTC
CAGGCGCACG GCGGCGAACT GGTGCTCGGC GAACCCGTCA CCGCACCGCC GGCCGGGGTG
ACCCTCTACG ACACCGCGCC CACCGCGTTG CTCGCCATCT ACGGCGACGC GGTACCGCCG
CGCTACGCAC GGGCGCTGCG CCACTACCGG TACGGCCCCG GGGTCTGCAA GGTCGACTTC
GTCCTGTCCG GTGAGATCCC GTGGCGCGAC CCGCGGGTCC GCGATGCGGT CACCGTGCAC
ATGGGCGGCA GCCGCGCGCA GATGGCGCTC GCCGAACGCG ACGTCGCCGC GGGCCGGCAC
GCCGAGTGGC CGATGGTGCT GGCGTCGCTC CCCCACCTGG CGGATCCGTC ACGCATCGAC
GCCCAGGGCC GCCGCCCGCT GTGGACCTAC GCGCACGTGC CGTCGGGCTC GGACGCCGAC
CTCACCGAGA CGGTGACCGC CATGTTCGAA CGCGCGGCGC CGGGTTTCCG CGATCTGGTC
GTCGGCGCCC GGTGCGTACC GGCGGCGCAG ATGTCGCTGC ACAACGCGAA TTACGTCGGC
GGCGACATCA TCGTCGGCGG GGCGACGCTG TTCGCCGCGA TGGCCGGACC GACGTTGCGG
CTCGACCCGT GGACCACCCC GATCCCCGGG GCGTACCTGT GCTCGTCGGC CACCCCGCCC
GGCACCGGTG TGCACGGGAT GGCCGGCTAC TACGCGGCGC GTACGATGCT GCGCCGCGAA
TTCGGCATCG AAAAGCTGCC GAGCCTGGCC CCCTGA
 
Protein sequence
MIGAGRSAAT GEVIGVDVTV VGSGPNGLAA AVICARAGLS VRVIEGQPTP GGGARSAADP 
EFPDVLHDVC SAVHPLSVAS PFFAEFDLAA RGVDLISPEV SYANPLPGRP AAVAYRSLDR
TCAELDHGES WRRLFGPLVE HVDGVLGFFL GDKRSLPPDL PTTVRTGLRV LAQGSPLWGS
LRGEDARALF TGVGVHAIKA IPSPVNSGAG LMLGTVAHTA GWPVPVGGTQ RISDALIADL
QAHGGELVLG EPVTAPPAGV TLYDTAPTAL LAIYGDAVPP RYARALRHYR YGPGVCKVDF
VLSGEIPWRD PRVRDAVTVH MGGSRAQMAL AERDVAAGRH AEWPMVLASL PHLADPSRID
AQGRRPLWTY AHVPSGSDAD LTETVTAMFE RAAPGFRDLV VGARCVPAAQ MSLHNANYVG
GDIIVGGATL FAAMAGPTLR LDPWTTPIPG AYLCSSATPP GTGVHGMAGY YAARTMLRRE
FGIEKLPSLA P