Gene Mkms_1948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_1948 
Symbol 
ID4613694 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp2065392 
End bp2066180 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content71% 
IMG OID639791612 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_937937 
Protein GI119867985 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGGGAC GTTGCACGGG CAAGGTGGCG CTGGTGACCG GGAGCAGCCG GGGCCTGGGT 
GCGGCGATCG CGACACGGCT GGCCGCCGAG GGGGCGGCGG TGGTGCTCAC GGCGCGCACC
CTGGAACCGG ATCCGAGATA CCGGGGGTCG CTGCAGGACA CGCGCGACAC GATCCTCACC
GCGGGCGGCA CCGCGGTCGC CGTCGCCGCG GACCTTTCCC GGCCCGAGGA GCGCGAGCGG
CTGTTCGCGG AGGCGACGAA GGAACTCGGC GCACCGGACA TCCTCGTCAA CAACGCGGCG
GTGACGTTCC TGCGACCGCT CGACGGTTTT CCCGACAAGC GGGTGCGCTT GATGCTGGAG
ATGCACCTGC TCGCACCACT GCACCTGAGC CAGTTGGCGA TCCCCGCGAT GCGCGAACGC
GGCCGCGGCT GGATCCTCAA CGTGACGTCG GTGGCCGGCG ACCTGCCGCC CGGTCCGCCG
TTCTCCGAGT TCGACCGCAC CGCCGGGTTC GGCGTCTACG GCACGGCGAA GGCCGCGCTG
AACCGATTGA CGAAAAGCCT TGCCGCAGAA CTGTTCGACG ACGGGATCGC GGTCAACGCG
GCGGCGCCGA CGAACCCGGT CGCCACGCCC GGCGCCGGCA CGCTCGACCT GGCCAAGACC
GACACCGAGG ACATCAGCCT CATCGCCGAG ACGGCGCTCA CGCTGTGCAC CGGTGATCCG
GCGACGCTGA CCGGACGGAT CGCCCACACC CAGTCGTTCC TCGGCGAGAT CGGTTGGCTG
CGTGAGTGA
 
Protein sequence
MTGRCTGKVA LVTGSSRGLG AAIATRLAAE GAAVVLTART LEPDPRYRGS LQDTRDTILT 
AGGTAVAVAA DLSRPEERER LFAEATKELG APDILVNNAA VTFLRPLDGF PDKRVRLMLE
MHLLAPLHLS QLAIPAMRER GRGWILNVTS VAGDLPPGPP FSEFDRTAGF GVYGTAKAAL
NRLTKSLAAE LFDDGIAVNA AAPTNPVATP GAGTLDLAKT DTEDISLIAE TALTLCTGDP
ATLTGRIAHT QSFLGEIGWL RE