| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mkms_1946 |
|---|
| Symbol | |
|---|
| ID | 4613692 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. KMS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008705 |
|---|
| Strand | + |
|---|
| Start bp | 2063112 |
|---|
| End bp | 2064413 |
|---|
| Gene Length | 1302 bp |
|---|
| Protein Length | 433 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639791610 |
|---|
| Product | acyl-CoA dehydrogenase domain-containing protein |
|---|
| Protein accession | YP_937935 |
|---|
| Protein GI | 119867983 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.735509 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCTGGG ATTTTTCGAC CGACCCCGAG TGGGCCGAGC AGTTGGCGTG GGTCGAGGAT
TTCGTCCGCG CCGAATGCGA GCCCATCGAC CTGATCGTCA AGGAATCCCA CGACCTGAAC
GATCCGGTGC GACAGGCGCT GATCCCGCCG CTGCAGCAGA TCGTCAAGGA GCGCGGACTG
TGGGCCACCC ATCTGGGCCC GCACCTCGGC GGCCCCGGCT ACGGTCAGGT CAAGCTGGCC
CTGCTCAACG AGATCCTGGG TCGCTCGGAG TGCGCGCCGA TCGTGTTCGG CTCCCAGGCC
CCCGACTCCG GCAACAGTGA GATCCTCGCC CACTACGGCA CTCCGGAACT CAAGCAGCGC
TACCTCGAGC CGCTGCTGGA CAACCGGATC ATCTCCTGTT TCTCGATGAC CGAACCGCAC
GGCGGGGCGG ATCCGAAGGT GTTCACCACC ACCGCCGTTC AGGACGGCGA CCACTGGGTG
ATCAACGGCG AGAAGTGGTA TTCGTCATTC GCGTCGATGG CCTCGTTCAT CATCGTGATG
GCGATGACGG ACCCGGATGC TCCTCCGTAT CAACGTTATT CGATGTTCGT CCTGCCCGGG
GGCACACCCG GTGTCAACGT CCTGCGCGAT GTCGGGCTCG GCTACCAGCC ACTCGGGGGT
GGTGGTCGAG AGGGATATGT GCGCTACGAG AACGTGCGGG TGCCCGCCGA CCACATGCTC
GGACCGCGCG GTGGCGCGTT CGTGGTGGCG CAGACCCGCC TCGGTGGTGG TCGTATCCAC
CACGCGATGC GCACCGTCGG TCTGGTGCGG CGGATCTTCG ACATGATCCG GGAGCGGGCG
GTGTCGCGGT ACACGCAGGG CGGCCTGCTC TCCGAGAAGC AGATGGTCCA GGAGATGGTC
GCCGACTCGT GGATGGAGAT CGAGGCGTTC CGTCTGCTGA CCCTGCAAAC CGCGTGGAAG
ATCGACCAGT ACAACGATTA CCGGGCCGTG CGCGCCGACA TCTCGGCGGT CAAGGCGATG
ATGCAGAAGG TGCTGCACGA CGTCTCGGCC CGGGCACTGC AGATCCACGG TTCGCTCGGT
ACGTCCCACG AGATGCCGTT CGTGCAGTAC CTCACCGAAT CGTTCGTGCT GGGGTTGGCC
GACGGACCCA CCGAGGTGCA CAAGGTCACG TTGGCCCGGC TGCTGCTCGC CGACGTCGAG
CCCGCCCCCG ACACCTTCCC GTCGCAGCAT CTGCTGCGCC TGCGCGCGCA GGCGGAGGAG
AAGTTCGCCG ACAAGCTCGC CGGGATCCCG CGCAGCGGGT GA
|
|---|
| Protein sequence | MAWDFSTDPE WAEQLAWVED FVRAECEPID LIVKESHDLN DPVRQALIPP LQQIVKERGL
WATHLGPHLG GPGYGQVKLA LLNEILGRSE CAPIVFGSQA PDSGNSEILA HYGTPELKQR
YLEPLLDNRI ISCFSMTEPH GGADPKVFTT TAVQDGDHWV INGEKWYSSF ASMASFIIVM
AMTDPDAPPY QRYSMFVLPG GTPGVNVLRD VGLGYQPLGG GGREGYVRYE NVRVPADHML
GPRGGAFVVA QTRLGGGRIH HAMRTVGLVR RIFDMIRERA VSRYTQGGLL SEKQMVQEMV
ADSWMEIEAF RLLTLQTAWK IDQYNDYRAV RADISAVKAM MQKVLHDVSA RALQIHGSLG
TSHEMPFVQY LTESFVLGLA DGPTEVHKVT LARLLLADVE PAPDTFPSQH LLRLRAQAEE
KFADKLAGIP RSG
|
|---|
| |