| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mkms_1937 |
|---|
| Symbol | gatA |
|---|
| ID | 4613683 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. KMS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008705 |
|---|
| Strand | + |
|---|
| Start bp | 2052897 |
|---|
| End bp | 2054384 |
|---|
| Gene Length | 1488 bp |
|---|
| Protein Length | 495 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639791601 |
|---|
| Product | aspartyl/glutamyl-tRNA amidotransferase subunit A |
|---|
| Protein accession | YP_937926 |
|---|
| Protein GI | 119867974 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
|---|
| TIGRFAM ID | [TIGR00132] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.846691 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAGCA CCGAGCTGAT CCGCGAAGAC GCCGCCACCC TGGCCGGCCG GATCGCCGCC
AAGGAGATCT CGTCCACCGA ACTCACCCAG GCGTGCCTGG ACCAGATCGC CGCCACCGAC
GATCGCTATC ACGCGTTCCT GCACGTGGCG GGCAACCGGG CACTGGCCGC CGCCGCCCGT
GTCGACGCCG CGGTGGCCGA GGGCGAGCGC CTGCCGTCAC CGTTGGCGGG TGTCCCGGTG
GCCCTCAAGG ACGTGTTCAC CACCACCGAC ATGCCGACCA CCTGCGGATC GAAGATCCTC
GAGGGCTGGC GTTCGCCGTA CGACGCGACG GTCACCTTCC GGCTCCGCGC GGCGGGACTG
CCGATCCTCG GCAAGACCAA CATGGACGAA TTCGCCATGG GCAGTTCCAC CGAGAACTCC
GCCTACGGAC CGACCCGGAA TCCGTGGGAC GTCGATCGGG TGCCCGGCGG GTCCGGCGGC
GGCAGCGCCG CGGCGCTCGC GGCGTTCCAG GCGCCGTTGG CCATCGGCAC CGACACCGGC
GGCTCGATCC GCCAGCCGGC GGCGCTGACC GCGACCGTCG GGGTGAAACC CACCTACGGC
ACGGTGTCGC GGTACGGGCT GATCGCCTGT GCGTCGTCGC TGGATCAGGG CGGGCCGTGT
GCGCGCACGG TGCTCGACAC CGCGCTGCTG CACCAGGTGA TCGCCGGCCA CGACCCCAGG
GACTCCACGT CGGTGCCCGC CGAGGTGCCC GACGTGGTCG CCGCGGCCCG TGCGGGTGCG
TCCGGTGATC TGAACGGGGT GCGGGTCGGG GTGGTCAAGC AACTGCGCGG CGAGGGCTAC
CAACCCGGTG TGCTGGCGTC GTTCACAGCC GCGGTCGAAC AACTCACCGC GCTCGGCGCC
GACGTCGTCG AGGTGGACTG CCCGAACTTC GACCATTCGC TGGCCGCCTA CTACCTGATC
CTGCCCTCGG AGGTGTCGTC GAACCTCGCC CGCTTCGATG CCATGCGGTT CGGCATGCGC
GTCGGCGACG ACGGCACCCA CAGCGCCGAA GAGGTGATGG CGATGACCCG GGCGGCCGGC
TTCGGGCCAG AAGTCAAGCG CCGCATCATG ATCGGCACCT ATGCGCTGTC GGCCGGCTAT
TACGACGCGT ACTACAACCA GGCGCAGAAA GTCCGCACCC TGATCGCCGG TGACCTCGAC
GCGGCGTACG AGAAGGTCGA CGTCCTGGTC ACCCCGGCCA CTCCGTCCAC GGCGTTCCGC
CTGGGGGAGA AGGTCGACGA TCCGCTGGCG ATGTACCTGT TCGACCTGTG CACGCTGCCG
CTGAACCTGG CCGGGCACTG CGGGATGTCG GTGCCCTCGG GCCTGTCCCC GGACGACAAC
CTGCCGGTGG GCCTGCAGAT CATGGCGCCC GCACTGGCCG ACGACCGCCT CTACCGGGTG
GGCGCGGCCT ACGAGGCGGC CCGCGGTCCG CTGCCCACCG CGTTATAG
|
|---|
| Protein sequence | MSSTELIRED AATLAGRIAA KEISSTELTQ ACLDQIAATD DRYHAFLHVA GNRALAAAAR
VDAAVAEGER LPSPLAGVPV ALKDVFTTTD MPTTCGSKIL EGWRSPYDAT VTFRLRAAGL
PILGKTNMDE FAMGSSTENS AYGPTRNPWD VDRVPGGSGG GSAAALAAFQ APLAIGTDTG
GSIRQPAALT ATVGVKPTYG TVSRYGLIAC ASSLDQGGPC ARTVLDTALL HQVIAGHDPR
DSTSVPAEVP DVVAAARAGA SGDLNGVRVG VVKQLRGEGY QPGVLASFTA AVEQLTALGA
DVVEVDCPNF DHSLAAYYLI LPSEVSSNLA RFDAMRFGMR VGDDGTHSAE EVMAMTRAAG
FGPEVKRRIM IGTYALSAGY YDAYYNQAQK VRTLIAGDLD AAYEKVDVLV TPATPSTAFR
LGEKVDDPLA MYLFDLCTLP LNLAGHCGMS VPSGLSPDDN LPVGLQIMAP ALADDRLYRV
GAAYEAARGP LPTAL
|
|---|
| |