Gene Mkms_1850 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_1850 
Symbol 
ID4613777 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp1965242 
End bp1965913 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content69% 
IMG OID639791516 
ProductHxlR family transcriptional regulator 
Protein accessionYP_937841 
Protein GI119867889 
COG category[K] Transcription 
COG ID[COG1733] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.363073 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGGTT ACGGCCAGTT CTGCCCCGTG GCCAAGGCCA TGGAAGTGCT CGACGAACGC 
TGGACGCTGC TGGTGGTCCG CGAATTGTTG CTCGGTAGTA CACATTTCAA CGAACTGCGC
CGTGGTGTGC CGAAGATGTC CCCGGCGCTG CTGTCGAAGC GGCTCAAGTC GCTGATCCGG
GCCGGTGTCG TCGAGCGCAG CGAAATCGAC GGTCGCACAA CATATTCGCT CACTCCCTGC
GGCAAGGAAC TGACCGCGGT GGTGGACGCG CTGGGCGCCT GGGGGGTGCG CTGGATCGGC
GAACTGGGCG AAGCCGACCT CGACCCGCAC CTGCTGATGT GGGACATGCG CAGGTCGATC
CCATTGACCG AATGGCCGGA CGGCCGCACC ACGCTGGCGT TCCGCCTCGA CGGAGTGGAG
GCGCGCGCGT CGCGCTGGTG GCTGGTGGTC GCCGACGGGC GGGCGGACGT CTGCGATTTC
GACCCCGGCT ACGAGGTGAC GGCGACAGTG TCGGCAGGCC TGCGCACGCT GACCGCGATC
TGGCGCGGCG ACATCAGTTG GCAGCGTGCT CTGCTCGACG GTGGCGTGTC GGTGTCGGGC
CCGGCAGAGG TCCGCCGCGC GGTGCCGGGC TGGATCGGTC AGGGTTCGCT GGCGGCGGTA
CCGCGGCCCT GA
 
Protein sequence
MSGYGQFCPV AKAMEVLDER WTLLVVRELL LGSTHFNELR RGVPKMSPAL LSKRLKSLIR 
AGVVERSEID GRTTYSLTPC GKELTAVVDA LGAWGVRWIG ELGEADLDPH LLMWDMRRSI
PLTEWPDGRT TLAFRLDGVE ARASRWWLVV ADGRADVCDF DPGYEVTATV SAGLRTLTAI
WRGDISWQRA LLDGGVSVSG PAEVRRAVPG WIGQGSLAAV PRP