Gene Mkms_1728 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_1728 
Symbol 
ID4613835 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp1843420 
End bp1844625 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content71% 
IMG OID639791394 
Productfumarate lyase 
Protein accessionYP_937720 
Protein GI119867768 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0015] Adenylosuccinate lyase 
TIGRFAM ID[TIGR02426] 3-carboxy-cis,cis-muconate cycloisomerase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGATC TGTTCTGGCC GGGCGACGAT CTCGCGGGCG ACCTGATGAG CGACGGCGCA 
TTCCTGTCCG CGATGGTCGC GGTGGAACAA GCCTGGCTGG ATGGACTCGT CGACGCGGGC
ATCGCGCCCC GGCAGGCGCG CGCGGACCTG ACCATCCTGC TCGCCGACGG TGACGCCGCG
ACGATCGCCC GGCGTGCTGG CGCGGACGGC AATCCCGTCT CCGCCCTGGT GCTGATGTTG
CGGGAACGCT CGGCGGAACC AACGGCCCGC TGGCTGCACC GCGGGCTGAC CAGTCAGGAC
GTCGTCGACA CCGCACTGAT GCTCTGCACG CGTGACGTCT TGATCCGCAT CGGCGACGAG
TTCGCCATCC AGGTACGGGC GCTGACCGAA CTGGCCGAAA CTCACCGTGA CACTTCGGCA
CTCGCCCGCA CGCTGACCCA GGCCGCACTG CCGAGCACCC TCGGCGCCAA GTTCGCCCGC
TGGCTGACCG GTGTACTCGA CGCCGCCGAG CCCATAGCGG GGCTGATGGC GTCGTTGCCG
GCGCAGGTCG GTGGCGCGGT GGGATCGCTC GCAGCCGCAA CCGAATTGGC CGGATCCGTC
GAGGGGGCCA TCGCTCTCAG TGACGGCTTG GCCGCCACGC TGCGGTTGGC GCCCACCCCG
CCCTGGCATA CCACCCGGTG GCAGGTCACC CGGATCGGCG ACGCGCTGGT GAGCTGCTGC
GACGCCTGGG GCCACATCGC CACCGACGTC ACGACGGGCT GTAGGCCCGA GATCGGCGAG
CTGGCTGAGG GGCATGGTGG CGGCTCGTCG ACGCTGCCGC ACAAGAACAA CCCGGTCCGC
TCGGTGCTGA TCCGCCGCGC CGCGCTCACC GCCGGACCCC TTGGCAGCAT CCTGCACACC
GCCGCAGGCG CGACCGTCGA CGAACGCTCC GACGGCGCCT GGCACACAGA ATGGGCAACC
CTGCGGACGC TGGCCCGCCA CACCGTCGTC GCCGCCGCGC ACACATCCGA CCTCCTGTCC
GGCCTCCGTG TCGACCCGCC GCGCGCCGCG GCCAATCTGG CCGCCGCCGA AAGCCTGCTT
TCCGAACAGC GCTCGATGAC CGAGCTGACA GGTCGTGCAG CGCTACCCGG CTACACCGGC
GCCGCGGATC GGCTGATCGA CTCGACACTC GGCCGGGCTT GCCGCTTCGT CAAGGACGCG
CCATGA
 
Protein sequence
MIDLFWPGDD LAGDLMSDGA FLSAMVAVEQ AWLDGLVDAG IAPRQARADL TILLADGDAA 
TIARRAGADG NPVSALVLML RERSAEPTAR WLHRGLTSQD VVDTALMLCT RDVLIRIGDE
FAIQVRALTE LAETHRDTSA LARTLTQAAL PSTLGAKFAR WLTGVLDAAE PIAGLMASLP
AQVGGAVGSL AAATELAGSV EGAIALSDGL AATLRLAPTP PWHTTRWQVT RIGDALVSCC
DAWGHIATDV TTGCRPEIGE LAEGHGGGSS TLPHKNNPVR SVLIRRAALT AGPLGSILHT
AAGATVDERS DGAWHTEWAT LRTLARHTVV AAAHTSDLLS GLRVDPPRAA ANLAAAESLL
SEQRSMTELT GRAALPGYTG AADRLIDSTL GRACRFVKDA P