Gene Mkms_1682 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_1682 
Symbol 
ID4613970 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp1797653 
End bp1798792 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content63% 
IMG OID639791349 
Productvirulence factor Mce family protein 
Protein accessionYP_937675 
Protein GI119867723 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component 
TIGRFAM ID[TIGR00996] virulence factor Mce family protein 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.695392 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGGGA AGCGCTTCGC TCGCGCCGCC GCGGTGATCA TGATCGCGCT GACCGTCGCC 
GGGCTGTCGG GATGCGGCTT TCGCGGGTTG AACTCCTTTC GGCTGCCCGG GACGCAAGGC
CAGGGGCAGG GCTCCTACAC GATTCAGGCC GAAATGCCCG ATGTCGAAAC CCTTCAGCCG
AACTCACGTG TCCGCGTGGG CGACGTCAAT GTGGGCACCG TCACGAAGAT CGAGCGTCGA
GGCTGGCATG CGCTGCTCAC ACTCGCACTC AACGGCGACG TCGACCTTCC CGCCAACTCG
ACCGTGTCGT TGGGTCAAAC CAGCCTGCTG GGCTCACTGC ACATCGAGTT GGCACCCCCC
ACCGATGTTC GTCCCGCGGG AAAACTCCGG GCCGGTTCAC TGATCCCGTT GACCTCAGCT
GGGGCTTACC CGTCTACCGA ACAGACCCTG GCGTCGGTAT CCCTCCTGCT CAACGGTGGC
GGAGTGGGGC AAGTACAGGA CATCACCACC GCCCTCACGT CTGCGCTGGG AGGCCGCGAA
GCCGACTTCC GCAGCCTGCT TACACAATTG GACACCTTCA CCGCGAACGT CAACGGTCAA
ATCGGCGACA TCATCGCGGC CACAGACAGC CTCAACAATC TGGTCGCCCA GTTCGCGGCG
CAAAAGCCGA TCATCGACAA GGCCCTGGAA ACAATCCCCG ACGCGCTGGC GGTTATCAAC
GCCGAACGCG ATCAGCTGGT GGAGGCGGTC GACCAGCTCG GCAAATTCAG CGCGCTGGCC
GCCGACACGG TCAACCAGTC CCAAGAGTCG TTGATCCAGA TCCTGAACGA CATGGGACCG
GTACTGGAAT CACTGGCTAA CGCCGGCCCG GCGCTGACCC GGTCCCTGAA CCTGTTCACC
ACGATTCCGT TCGTGAAAGA CAACCTGACC AAGTGGTGGC GCGGTGACTA CGCCAACATC
ACCACGATCG TGGACCTGAC TTTGAGTCGT ATCGACGCGG GGCTGTTCAC CGGTACCCGG
TTCGAAGGGC ACCTCACCGA ACTGGAATTG CAGTGGGGCC GCACGATCGG GCAACTGCCC
AGCCCCTACA CCGCGCGAAA CCCGTTGATC GTCCCCTACC GGCTGGATCA AGGACCGTAA
 
Protein sequence
MTGKRFARAA AVIMIALTVA GLSGCGFRGL NSFRLPGTQG QGQGSYTIQA EMPDVETLQP 
NSRVRVGDVN VGTVTKIERR GWHALLTLAL NGDVDLPANS TVSLGQTSLL GSLHIELAPP
TDVRPAGKLR AGSLIPLTSA GAYPSTEQTL ASVSLLLNGG GVGQVQDITT ALTSALGGRE
ADFRSLLTQL DTFTANVNGQ IGDIIAATDS LNNLVAQFAA QKPIIDKALE TIPDALAVIN
AERDQLVEAV DQLGKFSALA ADTVNQSQES LIQILNDMGP VLESLANAGP ALTRSLNLFT
TIPFVKDNLT KWWRGDYANI TTIVDLTLSR IDAGLFTGTR FEGHLTELEL QWGRTIGQLP
SPYTARNPLI VPYRLDQGP