Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mkms_1612 |
Symbol | |
ID | 4614081 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. KMS |
Kingdom | Bacteria |
Replicon accession | NC_008705 |
Strand | - |
Start bp | 1727692 |
End bp | 1728597 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639791283 |
Product | hydroxymethylglutaryl-CoA lyase |
Protein accession | YP_937609 |
Protein GI | 119867657 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.294134 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCGACT TGCCCGCCAA GGTCGACATC CGTGAGGTCT CGCTGCGCGA CGGCCTGCAG ATCGAACAGC CGATTCCCCT GTCGGCCAAG CTCGAACTGC TCGAAGCGGT GGTGGCCACC GGTGTGCGTG AGGTCGAGGC CACCGCCTTC GTCTCACCGT CGAAGGTGCC CGCACTCGCC GACGCGGCCG AACTCGCCGC CGAACTCGGC CGATTCGACC AGGTCGAGTT CTCGGCGCTG GTGGCCAGCC CGAACGGGGC CAAGCGGGCG ATCGCGGCGG GGCTGCGCTC GATCGAATAC GTGGTGTCGG CCGCCGACTC GCACAGCCGC GCCAACGTCG GGCGGTCCAG CATGGAGTCG GTCGCGGCCA TCCCCGACAT CGTCGCGATC GCCCACGACA GCAGCGCCAC CGTCGAGGTG ATCATCGCGA CCGCGTGGGA CTGTCCGTTC GACGGCCCGA CGCCACCGCA GCGTGTGCTT GAGATCGTCG ACGCTGCAGT GGAATTCGGT GTCGACCGGT TGGCGATCGC CGACACCATC GGCACCGCCA CCCCCCGCCG GGTCAGCGAC CTCGTCGCGC AGGTGCGTCC CCGCATCGGC GACCTGCCGC TGGGCGCCCA TTTCCACAAC ACCCGCGGTG CGGGGCTGGC CAGCGCGTAC GCCGCGGTCC AGGCCGGGAT CACCCGGCTC GACGCCTCGG TCGGCGGGCT GGGCGGCTGC CCCTTCGCAC CGGGTGCGAG CGGCAACATC GCCACCGAGG ACTTGGTCTA CCTGTTGCGC GACAGCGGGA TCGACTGCGA CGTCGACCTG CAGGGGGCCA TCGCCGCCGC CGAGGTCGCC CGCACGGTCG TCGGCCACGA CCTGCCCAGT GCGCTGCTGC GCGCCGGGGA CCGGATCATC GGCTGA
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Protein sequence | MSDLPAKVDI REVSLRDGLQ IEQPIPLSAK LELLEAVVAT GVREVEATAF VSPSKVPALA DAAELAAELG RFDQVEFSAL VASPNGAKRA IAAGLRSIEY VVSAADSHSR ANVGRSSMES VAAIPDIVAI AHDSSATVEV IIATAWDCPF DGPTPPQRVL EIVDAAVEFG VDRLAIADTI GTATPRRVSD LVAQVRPRIG DLPLGAHFHN TRGAGLASAY AAVQAGITRL DASVGGLGGC PFAPGASGNI ATEDLVYLLR DSGIDCDVDL QGAIAAAEVA RTVVGHDLPS ALLRAGDRII G
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