Gene Mkms_1551 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_1551 
Symbol 
ID4614020 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp1669932 
End bp1671074 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content64% 
IMG OID639791224 
Productvirulence factor Mce family protein 
Protein accessionYP_937550 
Protein GI119867598 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component 
TIGRFAM ID[TIGR00996] virulence factor Mce family protein 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.301578 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGGTC GAAAGGCATT GTGCTACCGA AGTTTCAGCC TGGTACTGGC CGTCGCCGTC 
GCTCTTCTGA CCGGGTGCCA GTGGCGCGGG TTGAACTCGC TGCCGATGCC AGGCACCCAG
GGTGGCGATG CCCGGTCCTA CGTGGTGCAA GCGCAACTCC CCGACGTCGG GACCATCGAA
CCGAACTCAC GAGTGCGCGT GGGAGACGTC AACGTCGGCA CCGTCACCAA GATCGAACGG
CAGGGCTGGC ATGCGCTGAT CACCATGCGG CTCAACGGCG ATGTCGAGTT GCCCGCCAAC
ACGACTGCCA CCGTGGGCCA GACGAGCCTG CTCGGCTCAT TGCATGTCGA GTTGAATCCG
CCAATCGACG CGCCCGCCCG GGGGAAGCTC GGTGCGGGCT CGCTGATTCC GCTGGCGGCT
GGGGCGTCCT ACCCGACCAC CGACCAGACA TTGGCGGCCT TGTCGCTGTT GCTCAACGGT
GGCGGAGTCG GCCAGCTCCA GGACATCACG GCGGCTTTCG CAACCGCATT CGCCGGCCGT
GAAAGTGACC TCCGCAGCCT CATCGAGCAA CTGGACCTGT TCGTCGGACG GCTCAACACC
CAGACCGGTG ACATCGTCGC CGCGACCGAG AGCTTCAACG GTCTCGTGGG TCAGTTGGCC
GACCAGAAGC CCGTCCTGGA CAACGCGATG CGAACCATTC CCGACGCGCT CCAAGTACTC
AGCGAACAGC GGGAGAACGT GACCGGCGCA GTGGACGGTT TCGGTAAGTT CAGCGCGCTG
ACCACCGACG CGGTGAACCA GACCAAGCAG AACCTCGTCG CCGAACTCCA AGCGGTCGGA
CCGGTACTGA AGTCGTTGGC CGACGCGGGA CCGGATATGA CGCGGTCGCT GAGCCTGCTG
TCCACGCTGC CGTGGCCGAA GGAGAACATC GACAAGATCG TGCGTGGGGA CTACCTCAAC
ACCGACGTGA TCTTCGACCT CACCTTGAGC AGGTTGGGTG ACGGGTTGCT CAACGGCACC
CGCTTCGAAG GCGACCTCAC CGAGCTGGAG ATGCAATGGG GCCGCACGAT AGGACAGCTC
CCCAGTCCGT ACACCGCGCG CAACCCACTC GTCGCGCCCT ACCAGGTGAA TCAGGGGCCG
TGA
 
Protein sequence
MAGRKALCYR SFSLVLAVAV ALLTGCQWRG LNSLPMPGTQ GGDARSYVVQ AQLPDVGTIE 
PNSRVRVGDV NVGTVTKIER QGWHALITMR LNGDVELPAN TTATVGQTSL LGSLHVELNP
PIDAPARGKL GAGSLIPLAA GASYPTTDQT LAALSLLLNG GGVGQLQDIT AAFATAFAGR
ESDLRSLIEQ LDLFVGRLNT QTGDIVAATE SFNGLVGQLA DQKPVLDNAM RTIPDALQVL
SEQRENVTGA VDGFGKFSAL TTDAVNQTKQ NLVAELQAVG PVLKSLADAG PDMTRSLSLL
STLPWPKENI DKIVRGDYLN TDVIFDLTLS RLGDGLLNGT RFEGDLTELE MQWGRTIGQL
PSPYTARNPL VAPYQVNQGP