| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mkms_1549 |
|---|
| Symbol | |
|---|
| ID | 4614018 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. KMS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008705 |
|---|
| Strand | + |
|---|
| Start bp | 1667339 |
|---|
| End bp | 1668655 |
|---|
| Gene Length | 1317 bp |
|---|
| Protein Length | 438 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639791222 |
|---|
| Product | virulence factor Mce family protein |
|---|
| Protein accession | YP_937548 |
|---|
| Protein GI | 119867596 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
|---|
| TIGRFAM ID | [TIGR00996] virulence factor Mce family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.427862 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACCCT TCGCCGAACG CAATCCCTTC GTCATCGGCC TGGCGGGCAT CACGGTGACG
GCCGGTATCG CGGTGATCGC GCTGCAGTAC GACAAACTGC CGTTCAGCAC GTCCGACAAC
GACTACTCGG CATACTTCGC GGAAGCCGGT GGTCTGCAGG CCGGGGCGCC CGTGCAGGTC
GCCGGTTTCC GCGTGGGCCA GGTGTCAGCG GTCGAACTCG ACGGCACCCG GGTGCTGGTC
GACTTCGACG TCGACGAGAA CGTGCATCTC GGTGAGCTGA CCGAAGCGCA CATCAGAACG
AAGAGCCTGC TCGGTTCCAA GGTCCTCGAG GTCACACCGC GCGGCGACGG TGACCTGACC
TCGACCATCC CCCTGGAGCG GACGCGGTCG CCCTACCAGC TCCCCGATGC GCTGGGCGAC
CTGTCGACGA CCATCAGCGG CCTGAACACC GACACGGTCT CCGCCGCTCT GGCGACACTG
GCCGACACCT TCCAGAACAC GCCGCCCGAC CTCCGGGCGG CGGTCGAGGG CGTCGGCAGG
TTCTCTCAGA CTCTCGGCGA ACGCGACGCC GAGCTGCGAA ACCTGTTGAG CAACGCCAGT
AAAGCCACGG GGGTGCTGTC CCAGCGCGCC GACGAGGTCG CCAAGCTGGT GGCGGACAGC
AATGCCCTGC TGGCGGCCCT GCGAGAGCAG AGCACCGCGC TGGAGCAGAT CTCCCGCAAC
CTCTCCGCAT TCGCGACCCA GCTCGGTGCC TTCATCGCCG AGAACCGGGA GCAGATGCGT
CCTGCGCTGG ACAAACTGAA CGGTGTTCTG ACGATCGTCG ACAACCGCAA GGAACGCATC
ATGTTGGCGA TCAAATACCT CAACCAGTAC ACGATGGGGC TGGGGGAGAC GGTCGGCTCC
GGTCCGTTCT TCAAGGCGTA CCTGGCGAAT CTGCCCGGCC AGCTGGTCCA GCCCTTCATC
GACGCGGCCT TCTCCGACCT CGGTCTCGAC CCGAACGTGC TGCCCCCGTC GCAACTGTCC
GATCCGCAGA CCGGGCAGCC TGCGACACCG GCGCTGCCCG TTCCGTTCCC GCGCACCGGC
CAGGGAGGCG AACCACGTCT CACCCTTCCC GATGCGATCA CCGGTAACCC GGGCGATCCG
CGCTACCCCT ACCGGGAACC GCTGCCCGCA CCGCCTCCTG GCGGGCCGCC CCCTGGACCG
CCCGCACCGT GGCCGACAGG TCAACAGCCC ACGGCTCAAC CGACCCCGTC GCCGGTGTTC
GAGCCGGCTC CGGGCGAACC CACGGCCGCG CCCGAACCCG TGAACGGAGG GCAGTGA
|
|---|
| Protein sequence | MKPFAERNPF VIGLAGITVT AGIAVIALQY DKLPFSTSDN DYSAYFAEAG GLQAGAPVQV
AGFRVGQVSA VELDGTRVLV DFDVDENVHL GELTEAHIRT KSLLGSKVLE VTPRGDGDLT
STIPLERTRS PYQLPDALGD LSTTISGLNT DTVSAALATL ADTFQNTPPD LRAAVEGVGR
FSQTLGERDA ELRNLLSNAS KATGVLSQRA DEVAKLVADS NALLAALREQ STALEQISRN
LSAFATQLGA FIAENREQMR PALDKLNGVL TIVDNRKERI MLAIKYLNQY TMGLGETVGS
GPFFKAYLAN LPGQLVQPFI DAAFSDLGLD PNVLPPSQLS DPQTGQPATP ALPVPFPRTG
QGGEPRLTLP DAITGNPGDP RYPYREPLPA PPPGGPPPGP PAPWPTGQQP TAQPTPSPVF
EPAPGEPTAA PEPVNGGQ
|
|---|
| |