| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mkms_1547 |
|---|
| Symbol | |
|---|
| ID | 4614016 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. KMS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008705 |
|---|
| Strand | + |
|---|
| Start bp | 1664876 |
|---|
| End bp | 1666297 |
|---|
| Gene Length | 1422 bp |
|---|
| Protein Length | 473 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639791221 |
|---|
| Product | virulence factor Mce family protein |
|---|
| Protein accession | YP_937547 |
|---|
| Protein GI | 119867595 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
|---|
| TIGRFAM ID | [TIGR00996] virulence factor Mce family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.848221 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAACCC TGAGTGTTCG CCACCGCGTC CACCCCCTGT GGTGGACCGC GGCACTGTTC
GGGACGGTCA TCGGCCTGGT CGTGGTGTGT TCGTTGACCT TCGCCGGCGC TTTCCGCCGA
GACGTCCCGG TCATGTTGAC CTCGGACCGG TCCGGACTCG TGATGGAGTC GGGTGCGAAG
GTCAAGATGC GGGGAGTGGA GGTCGGCCGG GTGGCCGGCA TCGCGGGCGG CGGCCGCACC
GTCGGTCTGA AACTGGAGCT CTTCCCCGAT CAGATCAGCC GCATCCCCGC CAACGTCGAG
GCCGAGATCT CCTCCACCAC AGCATTCGGC GCGAAGTACG TCGACCTCAT CTACCCGGAT
CATCCGAGCC CGCAACGCCT CAACGCCGGG GCGGTGTTGA AGTCACGCAA CGTCTCGACC
GAGGTGAACA CCGTGTTCGA CAACCTCGTC GGGTTGTTGG AACAGATCGA CGTGTCCAAG
TTGAGCGCCG TGCTCACCGC GGTTGCCGAC GGTGTGCGCG GCCAGGGCGA GCGCATGGGT
CAAGCCACCA CGGATGCGAA TCAGGTTCTG CTCGCGGTCA ATCCGAGGAT GGACGAGGTC
GGCGCGAACT GGTTGTCGTT CAGGAATTTC AGTGACGCCT ACAGGTCCGC CGCACAGGAC
ATCCTCGCCA CCCTGGACGC GGCGAGCGTG ACCAGCGGTA CGGTCACCGG CCACGCGAAG
GATCTCGACG CGCTGTTGTT GAGTTCGATC GGGTTCACCA ACAGCGGGAT CGAACTGATC
GCACCCAACC GGGACAATCT CGTCAAAGGC ATCAACATCC TCGAGCCGAC GACCAGTCTG
CTGCTCAAAT ACGACCCCAT CTACACCTGC CTGCTGCAGG GTGCGAAGTT CGCACTCGAC
AACGGGGCCT ACGAGAGCAT CGGCGGAAAC GGCCGTTCGG TGGTGCAGGA CGTCGGGCTG
CTCCTCGGCG ACGATCCGTA TCGCTATCCG CAGAACCTAC CGGTGGTGGC CGCCAAGGGC
GGTCCGGGAG GTAAGCCGAG TTGCGGCTCG CTGCCCGACG TGAGCAAGAA CTTCCCGGTT
CGCTACCTGG TCACCGACAC GGGCTTCGGC ACCGGGCTGG ACATCAGGCC GAACCCGGGA
ATCGGGTTCC CGGGCTGGGC CAACTACTTC CCCGTCACCA AGGCGGTGCC CGAACCCCCG
CGGGTTCGCC ATCCCGGCGG TCCTGCGCCG GGGCCGGCAC CGGCCTACCC GGGCGGGGCG
CCCTACGGCG CACCGCTGTA CGGGCCGGGT GGGACCCCGC TGTGGCCCGG TGTGCCGCCC
GCGCCCGCTC CCGCGCCGGC ACCGAGCGGG CCGCTACCCG CTGAAGCTCC TGTGCCCCCG
TCGGACTCGG ATCCGACCAC GCAGACGGCG CCGTCACCAT GA
|
|---|
| Protein sequence | METLSVRHRV HPLWWTAALF GTVIGLVVVC SLTFAGAFRR DVPVMLTSDR SGLVMESGAK
VKMRGVEVGR VAGIAGGGRT VGLKLELFPD QISRIPANVE AEISSTTAFG AKYVDLIYPD
HPSPQRLNAG AVLKSRNVST EVNTVFDNLV GLLEQIDVSK LSAVLTAVAD GVRGQGERMG
QATTDANQVL LAVNPRMDEV GANWLSFRNF SDAYRSAAQD ILATLDAASV TSGTVTGHAK
DLDALLLSSI GFTNSGIELI APNRDNLVKG INILEPTTSL LLKYDPIYTC LLQGAKFALD
NGAYESIGGN GRSVVQDVGL LLGDDPYRYP QNLPVVAAKG GPGGKPSCGS LPDVSKNFPV
RYLVTDTGFG TGLDIRPNPG IGFPGWANYF PVTKAVPEPP RVRHPGGPAP GPAPAYPGGA
PYGAPLYGPG GTPLWPGVPP APAPAPAPSG PLPAEAPVPP SDSDPTTQTA PSP
|
|---|
| |