| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mkms_1522 |
|---|
| Symbol | |
|---|
| ID | 4614173 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. KMS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008705 |
|---|
| Strand | + |
|---|
| Start bp | 1633826 |
|---|
| End bp | 1634653 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639791196 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_937522 |
|---|
| Protein GI | 119867570 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.155839 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCTGCTG GACATCTCGA TGGAAAGGTC GCACTGGTCT CGGGATCGGG GCGTGGGATC
GGCCGCGCGG TCGCCGAGAA GCTTGCCGCG GAGGGTGCCC GGGTCGTCAT CAACGACCTC
GACGCCGAGC CGGCCAAGGA GGTCGTCGCC GCGATCGAAG CCGCCGGGGG ACAGGCCACC
GCGTGCGTCG GCAGCGTGAC CGATCCCGAA TTCGCCGACC GCTTCGTCTC GACCGCCGTC
GACAACTACG GCGGGCTGGA CATCATCGTC AACAACGCCG GGTACACCTG GGACAGCGTG
ATCCAGAAGA TGACCGATCA GCAGTGGAAC GACATCATCG ACGTGCACCT GACCGCACCG
TTCCGGATCC TGCGCGCCGC CCAGCCGGTC ATCTCGGGTC TGGCCAAGAA GGAGAAGGCC
GAGAACGGCG TCGCCTCACG CCGCGCAATC GTCAACACGT CGTCGACCTC GGGGCTGCAG
GGCAACCCCG GGCAGGTCAA CTACTCCACC GCCAAGGCCG GCCTGATCGG TATGACCAAG
ACCCTGGCCA AGGAGTGGGG CCGCTACAAC GTCACCGTCA ATGCCATCGC CTATGGCGTG
ATCAACACCC GGCTCACCAC GATCACCACC GAGGCGAAGA CCATCGACGT CGCCGGCCGC
GAGATCAAGG TCGGCGTGAA CCCGGAGGTG TACGAGGCCG TGACCACCCA GATCGCACTG
GGCCGTGGCG GCAGCGTCGA GGAGGCCGCG GGCGCCGTGT ACCTGCTGTG CGCCCCGGAG
TCCAGCTACA TCACCGCGCA GACGCTGGTG TGCAGCGGCG GGGCCTGA
|
|---|
| Protein sequence | MAAGHLDGKV ALVSGSGRGI GRAVAEKLAA EGARVVINDL DAEPAKEVVA AIEAAGGQAT
ACVGSVTDPE FADRFVSTAV DNYGGLDIIV NNAGYTWDSV IQKMTDQQWN DIIDVHLTAP
FRILRAAQPV ISGLAKKEKA ENGVASRRAI VNTSSTSGLQ GNPGQVNYST AKAGLIGMTK
TLAKEWGRYN VTVNAIAYGV INTRLTTITT EAKTIDVAGR EIKVGVNPEV YEAVTTQIAL
GRGGSVEEAA GAVYLLCAPE SSYITAQTLV CSGGA
|
|---|
| |