Gene Mkms_1463 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_1463 
Symbol 
ID4614114 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp1576600 
End bp1577859 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content64% 
IMG OID639791139 
Productmajor facilitator superfamily transporter 
Protein accessionYP_937465 
Protein GI119867513 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0911464 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACTGC TGTCGGGCTT CACAAGCTTC GGCTGGCCAA GTCGCCTACT GATGATCAAC 
CAGTTCGGCA TCAACCTCGG TTTCTACATG CTGATGCCTT ACCTCGCGGG TTACCTGGCC
GGCCCACTGG GTCTGGCGGC CTGGGCCATC GGACTGGTAT TGGGGGTGCG GAACTTCTCC
CAGCAGGGCA TGTTCATCAT CGGTGGCACG CTCGCCGACC GGTGGGGATA TAAGCCGCTC
ATCGTCAGCG GCTGTGTGCT GCGCACCGCA GGGTTCGGTC TGCTAGCCTT CGCCGACACC
TTGCCTGCAG TGCTGATCGC CTCGGCGGCA ACAGGTTTCG CCGGTGCGCT GTTCAATCCG
GCCGTGCGCG CCTACCTCGC CGCTGATGCC GGACCGCGGC GACTCGAAGC GTTCGCGCTG
TTCAACGTGT TCTACCAGGC GGGGATTCTG GCTGGTCCGC TCGTCGGTTT AGCGCTGATG
CTGCTCGACT TCCGCACGAC CGCGGCCGCC GCGGCGGTGG TCTTCGCGGG ACTGACTGTT
GCGCAACTGT TCGCACTGCC GCAGCGAGTG GGTGACTCAC CGCGAGAGAA GACCTCGGTG
TGGCAGGACT GGCGCCGCGT TGCAGCCAAC CGGTCCTTCC TGTTGTTCGC CGCAGCCATG
ATTGGATCGT ATGTGCTGTC GTTCCAGGTG TACCTCGCTC TGCCGCTGCA GGCCCGGGAT
CTGTTCCCAC AGCACGATGC TGTCGTCACC GCCATGATCT TCGTGGTGTC TGGACTGGTC
GCGGTGATCG GTCAGCTGCG CATCACGCGA TGGTTCGCAC GCCGTTGGGG GTCAGGGCGA
TCGCTGGTCA TCGGCATGCT GATTCTCGCG GTTTCGTTCC TGCCTTTAGT GGCGTTGCCC
GACGACACGC GCGCGGGCCG TGTGGCGGCA GCCACCGCAC TGCTCATCGC CACAGCCGTG
CTGGCGGTGG GCTCGGCCGC GGTCTTCCCG TTCGAGATGG ACACGGTGGT ATCGCTAGCT
GACAACAAGC TCGTCGGTAC GCACTACGGC TTCTACAACA CCATCGTCGG CATCGGAATT
CTTGGCGGCA ATCTCGCCAC CGGCTCCGTC ATGCAGATCA CCCGCGAGCT CGGATACCCC
GAACTCGTCT GGGTCCTGCT GGCCAGTATC GGGCTGCTGT CGGCCGCCGC GCTGTACCGC
CTCGATCGAC GCGGCCGCCT GCAACCGCAA CAGCCCACAG TTGACGTCGC AACGTCATAA
 
Protein sequence
MTLLSGFTSF GWPSRLLMIN QFGINLGFYM LMPYLAGYLA GPLGLAAWAI GLVLGVRNFS 
QQGMFIIGGT LADRWGYKPL IVSGCVLRTA GFGLLAFADT LPAVLIASAA TGFAGALFNP
AVRAYLAADA GPRRLEAFAL FNVFYQAGIL AGPLVGLALM LLDFRTTAAA AAVVFAGLTV
AQLFALPQRV GDSPREKTSV WQDWRRVAAN RSFLLFAAAM IGSYVLSFQV YLALPLQARD
LFPQHDAVVT AMIFVVSGLV AVIGQLRITR WFARRWGSGR SLVIGMLILA VSFLPLVALP
DDTRAGRVAA ATALLIATAV LAVGSAAVFP FEMDTVVSLA DNKLVGTHYG FYNTIVGIGI
LGGNLATGSV MQITRELGYP ELVWVLLASI GLLSAAALYR LDRRGRLQPQ QPTVDVATS