Gene Mkms_1458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_1458 
Symbol 
ID4614109 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp1571507 
End bp1572910 
Gene Length1404 bp 
Protein Length467 aa 
Translation table11 
GC content66% 
IMG OID639791134 
ProductNLP/P60 protein 
Protein accessionYP_937460 
Protein GI119867508 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0791] Cell wall-associated hydrolases (invasion-associated proteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.614878 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.41084 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCGCT TCACTTCACT GCTCGGCATA GCAGCAATCA CAGTGACACT GCCCGTCAAC 
GCCACCGGCG TCGCGACAGC CACCCACGAA ACCAGGCCAT CGCCCAACAC CGACCTGCCC
ACCCTCGTCG CGTCCGTCGC CGAGGCCAAT CAGCGAGTGG CCGACATCGG CGCTGATATT
CAGAGCAAGC AGGAGGGCTT CAACAAAGCC CTGGTCGACA CAGCCGCTGC ACGCGACATT
CTCGCGACCA GACAGCAAGA ACTCACCGCC AGCGAGCAGG CGCTCACCGC CAGTCAGACC
GACATCGACA ACGCCCAATC CCGCTTCGAC CAGTTCGCCG CATCGATGTA CATGAACGGC
CCTTCACGCG CGCTACCGCT GGCCCGCAGC CCCGAAGAGA TCCTCGGCGC CGCCGCCACC
GAGCAGACAC TTACCCTCAG CTTCCGCCAG GCCGAAGACA ACCTTCACCG CACGCAAACC
GAACGCGCCA ACAAGGTTGC GGCCGCCCAG GCGGCCCGCC TACGCGCCGA TGAGGCCGCC
GCGGAAGCGC AACGACGACA AGATGCAGCG GTCGCCGAGC TCACCGCAGT ACAGCAGGCG
TTCGCCAGCC AACAGACCCA GCTGAACACC ATTGTTGCTC AACGCGACTC CGCCCGGGCG
CGACTGAACG AAGCCCGGCC GACCACGAGG GCCACCGCCC CGCCCTCACC GGGCCGCGCT
CAACCCGACT CCGCTCCGCC TCCCACCCAG TGGGACAGCG CCACACCGCC TAGTGGCCCC
GACGCCGGCC TCTGGGACAC CACGTTGCCG ATGGTGCCCA GCGCCAACGT CGCCGGCGAC
CCGATCGCCA TCATCAACGC TGTCCTGAAG ATCATGGCCA CCTCTGGCCA GTTGACCGCC
GACATGGGAC GCAAATTCCT GACCAAGCTC GGCATCCTCT CCCCCGCATC CGCCGCCGCT
GACCCTGGCA TCACCAACGG ACGAATCCCC CGCGTCTACG GCCAGCAGGC CTCCGAATTG
GTGATCCGCC GCGCCATGTC GCAGTTAGGC GTGCCGTACT CCTGGGGTGG CGGCAATGCC
AATGGTCCCG CTCGGGGCAT CGACCAGGGA GCCAACACCG TGGGCTTCGA CTGTTCGGGA
CTCATGCTGT ATGCGTTCGC GGGAGTAGGA ATCAAGCTCG ATCACTACTC CGGATCGCAG
TACAACGCCG GCCGCAAGAT CCCGTCTGCA CAGATGCGCC GCGGCGACCT CATCTTCTAC
GGTCCCAACG CAAGCCAACA CGAGGCGATG TACCTCGGCA ACGGCATGAT GATCGAAGCT
CCCTACACCG GCTCGGTCGT CAAGATATCC CCCGTGCGCT CCTCCGGCAT GACGCCCTAC
GTCACCCGCT TAATCGAGTA CTGA
 
Protein sequence
MRRFTSLLGI AAITVTLPVN ATGVATATHE TRPSPNTDLP TLVASVAEAN QRVADIGADI 
QSKQEGFNKA LVDTAAARDI LATRQQELTA SEQALTASQT DIDNAQSRFD QFAASMYMNG
PSRALPLARS PEEILGAAAT EQTLTLSFRQ AEDNLHRTQT ERANKVAAAQ AARLRADEAA
AEAQRRQDAA VAELTAVQQA FASQQTQLNT IVAQRDSARA RLNEARPTTR ATAPPSPGRA
QPDSAPPPTQ WDSATPPSGP DAGLWDTTLP MVPSANVAGD PIAIINAVLK IMATSGQLTA
DMGRKFLTKL GILSPASAAA DPGITNGRIP RVYGQQASEL VIRRAMSQLG VPYSWGGGNA
NGPARGIDQG ANTVGFDCSG LMLYAFAGVG IKLDHYSGSQ YNAGRKIPSA QMRRGDLIFY
GPNASQHEAM YLGNGMMIEA PYTGSVVKIS PVRSSGMTPY VTRLIEY