Gene Mkms_1386 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_1386 
Symbol 
ID4614217 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp1487205 
End bp1487996 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content70% 
IMG OID639791061 
Product3-oxoacid CoA-transferase, A subunit 
Protein accessionYP_937388 
Protein GI119867436 
COG category[I] Lipid transport and metabolism 
COG ID[COG1788] Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit 
TIGRFAM ID[TIGR02429] 3-oxoacid CoA-transferase, A subunit 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.315902 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACAATCG ACAAAGTCGT CGGTTCGGCC CGTGATGCGG TCGCCGACAT CCCGGCGGGC 
GCGAGCCTGG CCGTCGGTGG GTTCGGCCTC GCCGGTATCC CGTGGTTCCT CATCGAAGCG
CTGCTCGACC AGGGCGCCGA CGATCTGACC ATCGTCTCCA ACAACTGCGG GGTGGACGGC
GCCGGACTCG GTCTGCTCCT CGAAGCGGGC CGGATCAGCC GAGTGATCGC CTCGTACGTC
GGGGAGAACA AGGAATTCGG CAGGCAGTAC CTCGCCGGCG AGTTGACCGT CGAACTCACC
CCGCAAGGCA CGCTCGCCGA ACGGCTGCGC GCGGGTGGCA GCGGCCTCGG CGCGTTCTTC
ACTCCGACCG GTGTCGGCAC GCTGGTCGCC GAGGGTGGTC TGCCGTGGCG CTACCACCCC
GACGGCAGTG TCGCGCTCGC GTCACCCCCC AAGGAGGTTC GCAGTTTCGC CGGCCGCGAC
ATGGTGCTCG AGGAAGCGAT CGTCACCGAC TACGCGCTGA TCCGCGCCGC CGTCGTCGAC
CGGGCAGGCA ACTGCCGGTT CCACGCCGCG GCCCGCAACT TCAACCCGCC GGCGGCGATG
GCCGGCCGGG TCACCCTCGT CGAGGCGGAA GAGGTCGTCG AGGTGGGCGA ACTGGCTCCC
GACGAGATCC ACCTGCCCGG CATCTTCGTC CAGCGCATCG TGGCGCTCAC CCCGATCCAG
GCGCTGCGCA AGGACATCGA GAAGCGCACC ACCCGGCCCC GTCCGGACGC GACACAGGAG
GCGACGCGAT GA
 
Protein sequence
MTIDKVVGSA RDAVADIPAG ASLAVGGFGL AGIPWFLIEA LLDQGADDLT IVSNNCGVDG 
AGLGLLLEAG RISRVIASYV GENKEFGRQY LAGELTVELT PQGTLAERLR AGGSGLGAFF
TPTGVGTLVA EGGLPWRYHP DGSVALASPP KEVRSFAGRD MVLEEAIVTD YALIRAAVVD
RAGNCRFHAA ARNFNPPAAM AGRVTLVEAE EVVEVGELAP DEIHLPGIFV QRIVALTPIQ
ALRKDIEKRT TRPRPDATQE ATR