Gene Mkms_1380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_1380 
Symbol 
ID4614211 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp1480841 
End bp1482157 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content73% 
IMG OID639791055 
Product3-phosphoshikimate 1-carboxyvinyltransferase 
Protein accessionYP_937382 
Protein GI119867430 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0128] 5-enolpyruvylshikimate-3-phosphate synthase 
TIGRFAM ID[TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGGCG TGAGCAATTG GCCGGCCCCC TCGACGCCGA CCCCCGTGCA CGCCACGCTG 
ACGATCCCGG GTTCGAAGTC CCAGACCAAC CGGGCACTCG TGCTCGCCGC GCTGGCCACC
CCGCAGGGCA CGTCCACGAT CAGCGGCGCG CTGCGCAGCC GCGACACCGA CCTGATGATC
GGGGCCCTGC AGACCCTCGG ATTCGACGTC GAATCCGCCG GCACCGACAG CGACCTGCGC
GTCGGCGGAG GCCTGGGCCC CGCCGCCGGC GCCCGGGTCG ACTGCGGGCT CGCGGGTACG
GTCCTGCGGT TCCTGCCGCC CGTGGCGGCG CTGAGCACCG AGACCGTCGA ATTCGACGGT
GACGAGCAGG CCCGCGCCCG CCCGATCGCG CCGCTGCTGG CGGGGCTGCA GGCGCTCGGC
GTGCGCATCG ACGGCGACGG TCTGCCCTTC CGGGTGCGCG GTGAGGGTTC GGTGGCCGGC
GGCACCGTCG AGATCGACGC CTCGGCGTCA TCGCAGTTCG TCTCCGGGCT CATGCTGTCC
GGCGCCTTGT TCCGCGACGG GCTGACCATC GTGCACACCG GCGAATCGGT CCCGTCGGCG
CCGCACGTGG CGATGACCGT CAGCATGCTG CGCGACGCCG GCGTCGAGGT CGACGACACC
AAGACCAACC GGTGGACCGT GCGGCCCGGT CCCGTGGCGG CGCGCCACTG GACCATCGAA
CCGGACCTGT CCAATGCGGT GCCGTTCCTG TCCGCAGGCG TGGTCAGCGG CGGTGCCGTC
AGGATCACCG GCTGGCCGGC CGTGAGCACC CAACCGGCCG GGGCGATCAT GGCGATCCTC
GAGAAGGTCG GTGCGGTGGT GCGCCAGACC GAGTCGTACC TCGAGGTCCA GGGCACCCGG
CAGTACCAGG GGTTCGACGT GGACCTGCAC GACGTCGGGG AGCTCACCCC CGCGGTGGCG
GCGCTCGCGG CCGTGGCCAC CCCGGGTGCG GTGTCCCGGT TGCGCGGCGT CGCACACCTG
CGCGGCCACG AGACCGACCG GCTCGCCGCG CTGAGCGCCG AGATCAACGG CCTGGGCGGG
CAGTGCGAGG AGACCGACGA CGGACTGGTG ATCACCGCCG CGCCGCTGCA CGGCGGCGTC
TGGCACTCCT ACGCCGACCA CCGGATGGCG ATGGCCGGCG CCATCGTCGG GTTGCGCACC
CCCGGTGTCG AGATCGAGGA CATCGCCACC ACCGCGAAGA CGCTGCCCGA GTTCCCGCAG
ATGTGGGCGG ACATGCTGGC GGGGCAGACG GCCACCGACC CCGAGGCAGG CGCTTGA
 
Protein sequence
MDGVSNWPAP STPTPVHATL TIPGSKSQTN RALVLAALAT PQGTSTISGA LRSRDTDLMI 
GALQTLGFDV ESAGTDSDLR VGGGLGPAAG ARVDCGLAGT VLRFLPPVAA LSTETVEFDG
DEQARARPIA PLLAGLQALG VRIDGDGLPF RVRGEGSVAG GTVEIDASAS SQFVSGLMLS
GALFRDGLTI VHTGESVPSA PHVAMTVSML RDAGVEVDDT KTNRWTVRPG PVAARHWTIE
PDLSNAVPFL SAGVVSGGAV RITGWPAVST QPAGAIMAIL EKVGAVVRQT ESYLEVQGTR
QYQGFDVDLH DVGELTPAVA ALAAVATPGA VSRLRGVAHL RGHETDRLAA LSAEINGLGG
QCEETDDGLV ITAAPLHGGV WHSYADHRMA MAGAIVGLRT PGVEIEDIAT TAKTLPEFPQ
MWADMLAGQT ATDPEAGA