Gene Mkms_1370 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_1370 
Symbol 
ID4614201 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp1468205 
End bp1468885 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content67% 
IMG OID639791045 
Productsigma 54 modulation protein/ribosomal protein S30EA 
Protein accessionYP_937372 
Protein GI119867420 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1544] Ribosome-associated protein Y (PSrp-1) 
TIGRFAM ID[TIGR00741] ribosomal subunit interface protein 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.924171 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAACGC ATTCCACCGA AACCGACCGC ACGATGGTGA TCGAGGGCGA GCCCCCCGCG 
GAGGCGCCCA ACGCCGAGGT GGTGGTCAAG GGCCGCAACG TCGAGATTCC CGATCACTTC
CGAACCTACG TCGCCGAGAA GCTCACGCGG CTGGAACGGT TCGACCGCAC CATCTACCTC
TTCGACGTCG AGCTCGACCA CGAAAAGAAC CGTCGCCAGC GCAAGAACTG CCAGCACGTG
GAGATCACGG CGCGCGGACG TGGTCCCGTG GTCCGGGGTG AGGCCTGCGC GGACAGTTTC
TACGCCGCCT TCGAGGCGGC GGTGAGCAAA CTCGAGAACC GGCTGCGCCG CAGCAAAGAC
CGCCGCAAGA TCCACTACGG GGACAAGCGG CCGGTGTCGG TGGCCGAGGC CACCGCGGCG
ACAGCGGCGA TCGAACAGGA GACCCCGGCG CCCGCCGAGG ACACCGGCCT GCCCGACGGC
CTCACGCTGG ACGATCACGA ACCGGGGCGC ATCGTCCGCG TCAAGGACCA TCCCGCCACG
CCGATGACCG TGGACGATGC GCTGTCGCAG ATGGAACTCG TCGGCCACGA CTTCTTCCTC
TTCCACGACA AGGAGACCGA CAAGGCCACC GTCGTGTACC GCAGGCACGC CTACGACTAC
GGGTTGATCC GACTGGCCTG A
 
Protein sequence
MSTHSTETDR TMVIEGEPPA EAPNAEVVVK GRNVEIPDHF RTYVAEKLTR LERFDRTIYL 
FDVELDHEKN RRQRKNCQHV EITARGRGPV VRGEACADSF YAAFEAAVSK LENRLRRSKD
RRKIHYGDKR PVSVAEATAA TAAIEQETPA PAEDTGLPDG LTLDDHEPGR IVRVKDHPAT
PMTVDDALSQ MELVGHDFFL FHDKETDKAT VVYRRHAYDY GLIRLA