Gene Mkms_1336 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_1336 
Symbol 
ID4614349 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp1430949 
End bp1431812 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content74% 
IMG OID639791011 
ProductdTDP-4-dehydrorhamnose reductase 
Protein accessionYP_937338 
Protein GI119867386 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1091] dTDP-4-dehydrorhamnose reductase 
TIGRFAM ID[TIGR01214] dTDP-4-dehydrorhamnose reductase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.978104 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCAAC GTCTCGTGAT CACCGGTGCC GGCGGCATGG TCGGGCGCAT CCTGGCTGCT 
CAGGCACGCC GGCAGGGGCG CGACGTGTCG GCGCTCACCT CGTCGGACTG CGATATCACC
GACACCGCCG CCGTCGCGCG GGCGGTCGCT GCGGGTGACG TGGTGGTCAA CTGCGCGGCC
TACACCGACG TCGACCGCGC GGAGTCCGAA CCCGAGCGCG CGCATGCGGT CAACGCCGTC
GGTCCGGGCA ACCTCGCGGC CGTCTGCGCG CGGGTCGGCG CCGGCCTGAT CCACGTCTCG
ACCGACTACG TCTTCAGCGG AGACTTCGGC GGGGCGTCGC CGCACCCCTA TGAGATCGAC
GATGCGCCGG CGCCGCTGAG CGTCTACGGG CGCACCAAGC TCGCCGGAGA GCGGGCGGTG
CTCGACGCGC TGCCGCACGG GTACGTCGTG CGGACCGCCT GGGTCTACGA GGGCGCCGAC
GGCACCGACT TCGTCGCCGC GATGCGCCGC AAGGCACTCG GTGCGGACAC CGTCGACGTG
GTGGCCGACC AGATCGGCTC ACCCACCAGC GCGCACGACC TGGTCGCGGC GCTACTCGAG
ATCGCCGACG GGGGAGTGCG CGGACCGCTG CTGCACGCCG CCAACGACGG TCAGGCCAGC
CGCTTCGACC AGGCCCGCGC GGTCTTCGAG ACGGTGGGCG CCGACCCCGA GCGGGTGCGA
CCGGTCGGCA GTGACCGCGT CCCGCGGCCG GCACCCCGGC CCGCGTACTC GGCGCTGTCC
GGCGCCGGCT CGGCGGCGTG CGGCCTGACG GCGCTCCGGC CGTGGCGTGA GGCCCTGGTC
TCGGCATTGC GCGAGAGCCG GTGA
 
Protein sequence
MPQRLVITGA GGMVGRILAA QARRQGRDVS ALTSSDCDIT DTAAVARAVA AGDVVVNCAA 
YTDVDRAESE PERAHAVNAV GPGNLAAVCA RVGAGLIHVS TDYVFSGDFG GASPHPYEID
DAPAPLSVYG RTKLAGERAV LDALPHGYVV RTAWVYEGAD GTDFVAAMRR KALGADTVDV
VADQIGSPTS AHDLVAALLE IADGGVRGPL LHAANDGQAS RFDQARAVFE TVGADPERVR
PVGSDRVPRP APRPAYSALS GAGSAACGLT ALRPWREALV SALRESR