Gene Mkms_1298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_1298 
Symbol 
ID4614311 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp1392977 
End bp1393768 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content68% 
IMG OID639790973 
ProductRNA polymerase sigma factor SigF 
Protein accessionYP_937300 
Protein GI119867348 
COG category[K] Transcription 
COG ID[COG1191] DNA-directed RNA polymerase specialized sigma subunit 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02980] RNA polymerase sigma-70 factor, sigma-B/F/G subfamily 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0930015 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0420903 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGCCAT CGTCGGCACA GGGTTCGTCG CCACGACAGA ACTCTGAGTA CTCGGACGTG 
GCCCCCATGT TCCGGGAACT TCAGGGGCTC ACCCCGAGCA CACCTCAGTT CCAGCGTCAG
CGCGACCGGA TCGTCGAACG CTGCCTTCCG CTTGCCGATC ACATCGCCCG TCGCTTCGAC
GGCCGCGGCG AGCCGCGCGA CGACCTCGTC CAGGTCGCCC GGGTCGGCCT GGTCAACGCG
GTGATCCGCT TCGACGTCGA CGCCGGATCG GATTTCGTGT CGTTCGCGGT GCCCACCATC
ATGGGTGAGG TCCGGCGGCA CTTCCGGGAC AACAGCTGGT CGGTCAAGGT GCCCCGCCGG
CTCAAGGAAC TGCACCTGCG CCTCGGGTCG GCGACCGCCG AACTGTCCCA GCGCCTGGGC
CGCGCGCCGA CGGCCAGCGA ACTCGCCGAG GAACTCGGCA TGGACCGCGA CGAGGTGGTC
GAGGGCCTGG TCGCAGGCAG TTCATACAAC ACGCTGTCGA TCGACAGCGG CGGCAACAGC
GGTAACGAGG ATGCGCCCGC GATCGCTGAC ACCCTCGGCG ATGTGGACCT GGGTCTCGAC
CAGATCGAGA ACCGCGAGGC ACTGCGACCG CTGCTGGCCG CGCTTCCGGA GCGCGAGCGC
ATGGTCCTGC TGCTGCGGTT CTTCGAGAAC CTCACCCAGA CCCAGATCGC CGAACGGGTC
GGCATCTCGC AGATGCACGT GTCCAGGCTG CTGGCCAAAT CGCTAACGCG GCTCCGCGAC
CAGTTGCAGT AG
 
Protein sequence
MTPSSAQGSS PRQNSEYSDV APMFRELQGL TPSTPQFQRQ RDRIVERCLP LADHIARRFD 
GRGEPRDDLV QVARVGLVNA VIRFDVDAGS DFVSFAVPTI MGEVRRHFRD NSWSVKVPRR
LKELHLRLGS ATAELSQRLG RAPTASELAE ELGMDRDEVV EGLVAGSSYN TLSIDSGGNS
GNEDAPAIAD TLGDVDLGLD QIENREALRP LLAALPERER MVLLLRFFEN LTQTQIAERV
GISQMHVSRL LAKSLTRLRD QLQ