Gene Mkms_1287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_1287 
Symbol 
ID4614300 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp1383334 
End bp1384923 
Gene Length1590 bp 
Protein Length529 aa 
Translation table11 
GC content70% 
IMG OID639790962 
Productdelta-1-piperideine-6-carboxylate dehydrogenase 
Protein accessionYP_937289 
Protein GI119867337 
COG category[C] Energy production and conversion 
COG ID[COG1012] NAD-dependent aldehyde dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.195154 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCA CCTCCGCCAC GACCATGGCG TCTGACGCGG CTTCTCCTGC AGCACAGGTG 
CTGCCGACCG CCGACGAGTT GAGGGGCCGG GTGCGGACCG CCTTCGAATC CATCGGTGCG
ACCGCATACC TCGGCGCACC CGGCGGCGGG GGCCTGCCGG CCAGCACGCC GATCACAGGC
GAGGTGCTGT TCACCGTCGA GGAGAGTTCG CCGGCGCAGA CCGAGGCGGC GATCGAAGCC
GCGGCCGACG CGTTCGGGCA GTGGCGCACC ACGCCGCCGC CGGTGCGCGG CGCGCTGGTC
GCCCGGCTGG GCGAGTTGCT GGTCGAGCAC AAGGCGGCGC TGGCGTCCCT GGTGACCGTG
GAGGCCGGCA AGATCACGTC CGAGGCGCTC GGCGAGGTGC AGGAGATGAT CGACATCTGC
CAGTTCGCGG TCGGACTGTC GCGCCAGTTG TACGGCAGGA CGATCGCCTC CGAGCGCCCG
GGACACCGGT TGATGGAGAC CTGGCATCCG CTCGGGGTGG TCGGCGTGAT CACCGCATTC
AACTTTCCGG TGGCGGTGTG GTCGTGGAAC ACCGCCGTCG CGCTGGTGTG CGGGGACACG
GTCGTGTGGA AACCGTCCGA ACTCACCCCG CTGACGGCCA TCGCCTGTCA GGCCCTGTTG
CAGCGGGCGG CCGCCGACGT CGGTGCGCCG TCGGCCGTCG GCCAGTTGGT CCTCGGTGGG
CGCGACGTCG GCGAGACACT GGTCGACGAT CCGCGGGTCG CGCTGCTCTC GGCCACCGGT
TCGGTGCGGA TGGGCCAGCA GGTCGGCCCC CGGGTGGCCC AGCGGTTCGG CAGGGCGCTG
CTCGAACTCG GCGGCAACAA CGCCGCGATC GTGACGCCGT CGGCGGACCT CGACCTCGCG
GTGCGGGCGA TCGTGTTCTC GGCTGCGGGC ACCGCCGGTC AGCGCTGCAC CACCCTGCGC
AGGCTGATCG TGCACCGCTC GGTGGCCGAC GACCTCGTCG AGCGGATCGT GGCGGCGTAT
CGCCAACTGC CGGTGGGTGA TCCGGCCGCC GACGGTACGC TGATCGGACC ACTGATCCAC
GAGACCGCAT ACCGCGACAT GGTCGCCGCA CTCGAGACGG CCCGCGCCGA CGGCGGTGAG
GTGACCGGCG GTGAGCGCAG GATCTTCGAA GGTGACAGCG GTGACATGTC CTTCTACGTC
ACCCCGGCGG TGGTGCGGAT GCCCTCGCAG ACCGCCGTGG TGCACGCCGA GACGTTCGCG
CCCATCCTCT ACGTCCTGAC CTACGACGAT CTGGACGAGG CGATCGCCCT CAACAATGCT
GTGCCGCAGG GTCTTTCGTC TGCGATATTC ACCCTCGACG TGCGGGAGGC CGAACGGTTC
ATGGCCGCCG ACGGCTCCGA CTGCGGCATC GCCAACGTCA ACATCGGCAC CTCGGGAGCC
GAGATCGGCG GTGCGTTCGG CGGTGAGAAG CAGACCGGCG GCGGCCGCGA ATCCGGTTCG
GATGCGTGGA AAGCCTACAT GCGCAGGGCC ACCAACACGG TCAACTACTC CGCCGAGTTA
CCTCTGGCTC AAGGCGTGCA CTTCGGGTAG
 
Protein sequence
MTTTSATTMA SDAASPAAQV LPTADELRGR VRTAFESIGA TAYLGAPGGG GLPASTPITG 
EVLFTVEESS PAQTEAAIEA AADAFGQWRT TPPPVRGALV ARLGELLVEH KAALASLVTV
EAGKITSEAL GEVQEMIDIC QFAVGLSRQL YGRTIASERP GHRLMETWHP LGVVGVITAF
NFPVAVWSWN TAVALVCGDT VVWKPSELTP LTAIACQALL QRAAADVGAP SAVGQLVLGG
RDVGETLVDD PRVALLSATG SVRMGQQVGP RVAQRFGRAL LELGGNNAAI VTPSADLDLA
VRAIVFSAAG TAGQRCTTLR RLIVHRSVAD DLVERIVAAY RQLPVGDPAA DGTLIGPLIH
ETAYRDMVAA LETARADGGE VTGGERRIFE GDSGDMSFYV TPAVVRMPSQ TAVVHAETFA
PILYVLTYDD LDEAIALNNA VPQGLSSAIF TLDVREAERF MAADGSDCGI ANVNIGTSGA
EIGGAFGGEK QTGGGRESGS DAWKAYMRRA TNTVNYSAEL PLAQGVHFG