| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mkms_1240 |
|---|
| Symbol | |
|---|
| ID | 4614436 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. KMS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008705 |
|---|
| Strand | + |
|---|
| Start bp | 1326922 |
|---|
| End bp | 1327845 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639790915 |
|---|
| Product | RNA polymerase sigma factor SigJ |
|---|
| Protein accession | YP_937242 |
|---|
| Protein GI | 119867290 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
|---|
| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.833908 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCGA GTGCGCGGAT CGACGAGTTC GAGAGCCTGC GACCGTATCT GCTGTCGGTG
GGCTACCGCC TGACGGGTTC GGTGGCCGAT GCCGAAGACG CCGTGCAGGA TGCCTGGCTG
CGGTGGGATG CGCTGGGGGA GGACTGGTCC GGCATCGCCG ATCTGCGCGC GTGGCTGACG
ACGGTGGTCA GCCGCATCGG CCTCGACCGG TTGCGGTCGG CCGCCCGGCG GCGGGAGACC
TACGTCGGCG AATGGCTGCC CGAACCCGTC GTCACGGGAT TGGACCGCAC CGATCCGTTG
TCGGCGGTGG TCGCCGCCGA GGACGCCCGG TTCGCGGCGA TGGTGGTGCT CGACCGGTTG
ACGCCCGACC AGCGGGTGGC GTTCGTCCTG CACGACGGCT TCGCGGTGTC GTTCACCGAG
ATCGCCGGCG TCCTCGGGGT GAACCCCGCC GCGGCCCGTC AACTCGCGTC GCGGGCCCGC
CGGGCCGTCG CCGATGCCGA GGCACCCGCC CGCGACCCGT CCCACGACGA GGTCGTGGGC
CGGCTGATGG CGGCGATGGC AGCGGGTGAC ATGGCCGCCG TCGTTGAACT GCTGCACCCC
GACGTCACCT TCACCGGAGA CTCGAACCGT AAGGCGCCCA CCGCTCCTCG CGTCATCCAC
GGCGCCGACA AGGTGGCCAG GTTCGTCTTC GGGCTGGCCC GTCGCTACGG GCCGCGGTTC
TTCGAGGCGG GCGAGCTCGC ACTCGTCAAC GGCGACCTCG GCCTCTGCAC CGCGGGCCTG
CCCGCCGACG GTGAGTGGCC CGCGATGGCG CCGCGCATCC AGGCGCTGAC CGTGCGCGAC
GGCAAGGTGT GCGCGATCTG GGACGTCGCC AACCCGGACA AGTTCACGGC TTCGCCCATG
GCACCCGGCA GGCGTCGGTA CTGA
|
|---|
| Protein sequence | MTASARIDEF ESLRPYLLSV GYRLTGSVAD AEDAVQDAWL RWDALGEDWS GIADLRAWLT
TVVSRIGLDR LRSAARRRET YVGEWLPEPV VTGLDRTDPL SAVVAAEDAR FAAMVVLDRL
TPDQRVAFVL HDGFAVSFTE IAGVLGVNPA AARQLASRAR RAVADAEAPA RDPSHDEVVG
RLMAAMAAGD MAAVVELLHP DVTFTGDSNR KAPTAPRVIH GADKVARFVF GLARRYGPRF
FEAGELALVN GDLGLCTAGL PADGEWPAMA PRIQALTVRD GKVCAIWDVA NPDKFTASPM
APGRRRY
|
|---|
| |