| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mkms_1232 |
|---|
| Symbol | |
|---|
| ID | 4614428 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. KMS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008705 |
|---|
| Strand | + |
|---|
| Start bp | 1318395 |
|---|
| End bp | 1319282 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 639790907 |
|---|
| Product | 2-nitropropane dioxygenase, NPD |
|---|
| Protein accession | YP_937234 |
|---|
| Protein GI | 119867282 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.86313 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCTGT CGACGCCGTG GTGCCGGGCG ATGGGTTTCG ATGTGCCCAT CGTCAACGCC
CCGATGGGCG GGGCCGCCGG CGGCCGGCTC GCCGCGGCGG TCTCGCGTGC CGGGGGCCTC
GGCGTGGTCG GGATGGGCAG CGCGGGCACC GCCGAACAAC TCGGCGCTGA GCTGGACGCG
CTGACCGGTC TGGACCGGCC GTTCGGCATC GGGCTCGTGC ACTGGGTCGC CGAAGCGCGC
CCGGATCTGC TCGAGCGGGC CCTCTCCGCC CGGCCGGCGC TGCTGTCGGT GAGCTTCGGC
GAGGACTGGT CGTGGGTGCG CCGCGCGCAC GAGGTGGGTG CCACCGCGGT GACCCAGGTC
GGCACCGTCG CCGCCGCGCG CCGGGCGGTC GACGCCGGTG TCGATGCGCT GGTGGCCCGC
GGTGCCGAGG GCGGCGGCCA CGGCGAGCCG CGGGTCGGGA CGCTGGCGTT GCTGACCGAT
CTGCTCGACC GCGTCGACGT GCCCGTGCTG GCCGCCGGCG GGATCGCGTC CGGACGCGGT
CTTGCCGCCG TCCTGGCCGC GGGTGCCTCG GCGGCGTGGA TCGGCACCGT GTTCGCCGCG
TGCCCGGAGG CGACGACACA GCCGGCGGCG CGTGCGGCCC TGGTCGCCGC CGAGGGTGAC
GAGACGACGC TGACCCGGGC CTTCGACATC GACAGCGGCT ACCCGTGGCC AGACCACCTG
CCCGAACGCG TGCTGACCGA CGGCGCCGGC CGACCGACGC CGGTCAACGC GGGCCAGGGG
GTGGGCATGG TGACGCAGGC GGAGCCGGCG GCCGACCTGA TCGCGCGACT GTGCGCGGAG
GCCGAGGGGC TGCTGCGCCG CTGGGTCAGT TCTGCGGACG CCGGTTGA
|
|---|
| Protein sequence | MPLSTPWCRA MGFDVPIVNA PMGGAAGGRL AAAVSRAGGL GVVGMGSAGT AEQLGAELDA
LTGLDRPFGI GLVHWVAEAR PDLLERALSA RPALLSVSFG EDWSWVRRAH EVGATAVTQV
GTVAAARRAV DAGVDALVAR GAEGGGHGEP RVGTLALLTD LLDRVDVPVL AAGGIASGRG
LAAVLAAGAS AAWIGTVFAA CPEATTQPAA RAALVAAEGD ETTLTRAFDI DSGYPWPDHL
PERVLTDGAG RPTPVNAGQG VGMVTQAEPA ADLIARLCAE AEGLLRRWVS SADAG
|
|---|
| |