Gene Mkms_1217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_1217 
Symbol 
ID4614413 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp1301344 
End bp1302300 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content71% 
IMG OID639790892 
Producthelix-turn-helix domain-containing protein 
Protein accessionYP_937219 
Protein GI119867267 
COG category[K] Transcription 
COG ID[COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.302874 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACACGC ACACCGCGAG CCTCGTCCGC CGCGCCTCGT GGGCCACGCC CGACCTCGCC 
GAGGCGCACG ACCTCCTGCA CGCCGAGTAC GGGGCCAGCC TGAGGCTGGG CGAATCGCGG
GCTTCGGCCC GCCAGCTCAG CGTCGACCGT CGTCAGACCC CCACCTTCGA ATGCCACGAC
GTGCGGTTGC CCGCCCGCCT TCAGTTCGAC GTCGAGGACT ACGGCGGTGT GGTCATCGCC
GCCCTGCAGG CCGGCACGGT GACCGCGAAC AGCGACGCCC ACGGCGTCTC GTACCGGCGG
GGTGACGTGT TCATGTCGAA CTTCCCCGGC GCGCACTACC GCTGCCACAC CGACCACGCC
TGGTCGCACA CCGTCACCAT CCCGGTGCGG GTGCTTGCCG AATCCGCCGG TGTCCCGCCG
TCGTCGCTGC GGTTCATGTC GGGCAACCCG GTCAGCGCCG ACGCCGCCGC GAAGTGGGTG
GCCACGCTCG AGACCGTGGA GCGGTTGCTC GACGACCCGG ACACCGCCAA CCCGATCGTG
CTCGGCAAGG CCGGCCGCAT GCTGGCCGCC CGAGTGCTCG AGATCTTCCC CGTGACCAGG
ACACCCGGGA CGGAACACCC GGGCCGGCTG GTGCCCAACT TCCTCCGAAG GGCGATCGCC
TACATGGAGG ACAACGCCAC CGCGGACATC GGCGTCGCCG ACATCGCCGC CGCGGTCGAG
CTCACCCCCG ACGGCGTGAC CTACCTGTTC CGGCGTCACC TCGGGGTGGG CCCGCTCGAT
CACCTGCGTC GCATCCGGCT CGACCACGCC CACCGGGACC TGCTCGACCA CGACCCCGAG
TCGACGACGG TGTTCTCCAT CGCGGCCCGC TGGGTGTTCC CGCACCTGCC GTCGTTCGAG
GAGCTCTACT GCGGCTCCTA CGGCCAGAAT CCGCGGGACA CGCTGCAGGC CGGCTGA
 
Protein sequence
MDTHTASLVR RASWATPDLA EAHDLLHAEY GASLRLGESR ASARQLSVDR RQTPTFECHD 
VRLPARLQFD VEDYGGVVIA ALQAGTVTAN SDAHGVSYRR GDVFMSNFPG AHYRCHTDHA
WSHTVTIPVR VLAESAGVPP SSLRFMSGNP VSADAAAKWV ATLETVERLL DDPDTANPIV
LGKAGRMLAA RVLEIFPVTR TPGTEHPGRL VPNFLRRAIA YMEDNATADI GVADIAAAVE
LTPDGVTYLF RRHLGVGPLD HLRRIRLDHA HRDLLDHDPE STTVFSIAAR WVFPHLPSFE
ELYCGSYGQN PRDTLQAG