Gene Mkms_1187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_1187 
Symbol 
ID4614383 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp1270386 
End bp1272161 
Gene Length1776 bp 
Protein Length591 aa 
Translation table11 
GC content68% 
IMG OID639790862 
ProductFAD dependent oxidoreductase 
Protein accessionYP_937189 
Protein GI119867237 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2303] Choline dehydrogenase and related flavoproteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCCTG ACTACGACGT CCTCATCATC GGTTCGGGGT TCGGTGGCAG CGTCACCGCG 
CTGCGGCTCA CCGAGAAGGG CTATCGGGTC GGCGTACTCG AAGCGGGCCG CCGCTTCGCC
GACGAGGACT TCGCCAAGAC GTCGTGGGAT CTGCGGAACT TCCTGTGGGC GCCGCAACTG
GGCTGCTTCG GCATCCAGCG CATTCATCTG CTCCGCGACG TCCTCATCCT GGCCGGCGCG
GGTGTCGGCG GCGGATCGCT CAACTACGCC AACACCCTCT ACGTCCCGCG TGAGCCGTTC
TTCAACGACC CGCAGTGGAA GCACATCACC GACTGGAACG AAGAGCTGCT GCCGCACTAC
GAGCAGGCCC AGCGGATGCT CGGCGTGGTC ACGAACCCGA CGTTCACCGA CGCCGACCGC
GTCGTGAAGG AAGTCGCCGA GGACATGGGC GTCGGCGACA CCTTCGTCCC GACGCCGGTG
GGCGTGTTCT TCGGCCCCGA CGGGCAGAAG GCCCCGGGCA AGACGGTGCC CGACCCCTAC
TTCGGCGGTG TCGGCCCGGC CCGCAGGGGT TGCATCGAGG TCGGCGAATG CATGACGGGC
TGCCGCCACA ACGGCAAGAA CACCCTGGTG AAGAACTACC TCTACCTCGC CGAGCGGGCG
GGCACCGAGG TACATCCGCT GACCACCGTG ACCAGCTTCG AACAGCGCGC CGACGGCGTC
TGGGAGGTGA GCACCGTGCG CACCGGCCGC AAGGTGCGCC GCCAGAAGCG CACCTTCACC
GCCAACCATG TCGTCCTTGC GGCGGGCACG TTCGGCACTC AGAAGCTGCT GTTCAAGATG
CGTGACGCCG GGAAGCTCCC CGAGCTGTCC GACCGGCTGG GCATGCTGAC CCGGACCAAC
TCGGAATCCA TCGTCGGCGC CGGGAAATTC GAGGTCACCG ACGACCTCGA CCTCACCCAC
GGCGTGGCGA TCACTTCGTC GATCCACCCG ACCTCCGACA CCCACATCGA ACCGGTGCGC
TACGGCAAGG GCTCCAATGC GATGGGGCTG CTGCAGACAC TGATGACCGA CGGCGCCGGC
CCGGAGGGCA CCGACGTGCC GCGCTGGAAG CAGCTGTTCC ACAACGCCAA AGCGGATCCG
CGCGGCACCA TGCGACTGCT CAACGTGCGG CGCTGGAGCG AACGGACGCT GATCGCGCTG
GTCATGCAGA ACCTCGACAA CTCCATCACC ACCTTCACCA AGCGCACGAA GTTCGGCACC
CGCCGGCTGA CGAGCAAACA GGGCCACGGT GAGCCGAACC CGACGTGGAT CCCGGTGGGC
AACGAGGTGA CGCGGCGGAT CGCCGAGAAG ATCGACGGCG TCGCGGGCGG CACCTGGGGC
GAATTGTTCA ACATCCCCCT GACGGCACAC TTCCTCGGCG GCGCCGCCAT CGGCGACAGC
GCCGAGCACG GAGTCATCGA CCCCTACCAC CGCGTCTACA ACTATCCGAC GCTGTACGTC
ACCGACGGGG CGGCGATCTC GGCCAACCTC GGCGTCAACC CGTCCCTGAC CATCAGCGCA
CAGGCGGAAC GGGCGGCCTC GCTGTGGCCG AACAAGGGCG AAGAGGATCT GCGACCCGCA
CAGGGCGAGG GGTACCGCCG CCTGGACCCG ATCCGCCCTG CGCAGCCCGT GGTGCCCGCC
GGTGCGCCCG CGGCCCTGGA CTGGAACGCC AGCCGCGAGG AGGTCAACCG CCGCGACCCC
ACCACCGCCG AGGCTTCCGA GGCGCGCGGC GCCTGA
 
Protein sequence
MQPDYDVLII GSGFGGSVTA LRLTEKGYRV GVLEAGRRFA DEDFAKTSWD LRNFLWAPQL 
GCFGIQRIHL LRDVLILAGA GVGGGSLNYA NTLYVPREPF FNDPQWKHIT DWNEELLPHY
EQAQRMLGVV TNPTFTDADR VVKEVAEDMG VGDTFVPTPV GVFFGPDGQK APGKTVPDPY
FGGVGPARRG CIEVGECMTG CRHNGKNTLV KNYLYLAERA GTEVHPLTTV TSFEQRADGV
WEVSTVRTGR KVRRQKRTFT ANHVVLAAGT FGTQKLLFKM RDAGKLPELS DRLGMLTRTN
SESIVGAGKF EVTDDLDLTH GVAITSSIHP TSDTHIEPVR YGKGSNAMGL LQTLMTDGAG
PEGTDVPRWK QLFHNAKADP RGTMRLLNVR RWSERTLIAL VMQNLDNSIT TFTKRTKFGT
RRLTSKQGHG EPNPTWIPVG NEVTRRIAEK IDGVAGGTWG ELFNIPLTAH FLGGAAIGDS
AEHGVIDPYH RVYNYPTLYV TDGAAISANL GVNPSLTISA QAERAASLWP NKGEEDLRPA
QGEGYRRLDP IRPAQPVVPA GAPAALDWNA SREEVNRRDP TTAEASEARG A