Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mkms_1171 |
Symbol | groEL |
ID | 4614549 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. KMS |
Kingdom | Bacteria |
Replicon accession | NC_008705 |
Strand | + |
Start bp | 1255814 |
End bp | 1257436 |
Gene Length | 1623 bp |
Protein Length | 540 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639790847 |
Product | chaperonin GroEL |
Protein accession | YP_937174 |
Protein GI | 119867222 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
TIGRFAM ID | [TIGR02348] chaperonin GroL |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.320819 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAAGC AGATCGAATT CAACGAAACT GCGCGCCGCG CAATGGAGAT CGGCGTAGAC AAGCTCGCCG ACGCGGTGAA GGTGACCCTG GGGCCGCGCG GTCGCAACGT GGTGCTCGCC AAGTCGTGGG GCGGCCCGAC CGTCACCAAC GACGGTGTCA CCATCGCCCG TGAGATCGAC CTCGAGGATC CGTTCGAGAA CCTCGGCGCC CAGCTGGTCA AGTCGGTGGC GACCAAGACC AACGACGTCG CCGGCGACGG CACCACCACC GCCACCGTGC TGGCGCAGGC GCTGGTGCGC GCCGGTCTGC GCAACGTCGC GGCCGGCGCC AACCCGATCG CCCTGGGCGC GGGGATCAGC AAGGCCGCCG ACGCCGTGTC CGAGGCGCTG CTGGCCGCGG CCACCCCCGT CGACGACAAG AGCGGTATCG CCCAGGTCGC CACGGTCAGC TCACGCGACG AGCAGATCGG CGAGCTGGTC GGCGAGGCGA TGACCAAGGT CGGCCACGAC GGTGTCGTGA CCGTCGAGGA GTCCTCGACC CTGAACACCG AACTCGAGGT CACCGAGGGC GTCGGCTTCG ACAAGGGGTT CATCTCGGCG TACTTCGTCA CCGACTTCGA CTCCCAGGAA GCGGTGCTCG AGGACGCGCT GGTGCTGCTG CACCGCGAGA AGGTCAGCTC GCTGCCGGAC CTGCTGCCGC TGCTGGAGAA GGTCGCCGAA GCCGGTAAGC CGCTGCTGAT CATCGCCGAG GACGTCGAGG GTGAGGCGCT GTCCACACTG GTGGTCAACG CGATCCGTAA GACGCTCAAG GCCGTCGCCG TCAAGGCGCC GTTCTTCGGT GACCGTCGCA AGGCGTTCCT CGACGACCTC GCCGTCGTCA CCGGCGGCCA GGTGATCAAC CCCGACGTCG GCCTGGTGCT GCGCGAGGTC GGCCTCGACG TCCTGGGCAC CGCGCGCCGC GTGGTGGTCA CCAAGGACAG CACCGTGATC GTCGACGGCG GCGGCAGCGC CGACGCCATC GCCGACCGGG CCAAGCAGCT GCGGGCCGAG ATCGAGGCGA CCGACTCCGA CTGGGATCGC GAGAAGCTCG AGGAGCGGCT GGCCAAGCTG GCCGGCGGCG TCGCGGTGAT CAAGGTCGGT GCGGCCACCG AGACCGATCT GAAGAAGCGC AAGGAAGCCG TCGAGGACGC GGTCTCCGCG GCCAAGGCGG CCGTCGAGGA GGGCATCGTC ACCGGCGGCG GTGCCGCCCT GGTGCAGGCC CGCAAGGCGC TGGACAGCCT GCGGGGCTCG GTCTCCGGCG ACGAGGCGCT CGGTGTCGAG GTGTTCAACT CCGCGCTGTC GGCTCCGCTG TACTGGATCG CCACCAACGC CGGGCTCGAC GGTTCGGTCG TGGTGAACAA GGTCAGCGAA CTGCCTGCGG GACAGGGCTT CAACGCCGCG ACGCTCGAGT TCGGCGACCT GCTCGCCGAC GGCGTCGTCG ACCCGGTCAA GGTGACGCGA TCGGCGGTGC TCAACGCCGC GTCGGTCGCC CGCATGGTGC TCACCACCGA GACCGCGATC GTCGACAAGC CGGCCGAGGA AGAGGATCAC GGCCACGGCC ACCATCACGG CCACGCTCAC TGA
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Protein sequence | MSKQIEFNET ARRAMEIGVD KLADAVKVTL GPRGRNVVLA KSWGGPTVTN DGVTIAREID LEDPFENLGA QLVKSVATKT NDVAGDGTTT ATVLAQALVR AGLRNVAAGA NPIALGAGIS KAADAVSEAL LAAATPVDDK SGIAQVATVS SRDEQIGELV GEAMTKVGHD GVVTVEESST LNTELEVTEG VGFDKGFISA YFVTDFDSQE AVLEDALVLL HREKVSSLPD LLPLLEKVAE AGKPLLIIAE DVEGEALSTL VVNAIRKTLK AVAVKAPFFG DRRKAFLDDL AVVTGGQVIN PDVGLVLREV GLDVLGTARR VVVTKDSTVI VDGGGSADAI ADRAKQLRAE IEATDSDWDR EKLEERLAKL AGGVAVIKVG AATETDLKKR KEAVEDAVSA AKAAVEEGIV TGGGAALVQA RKALDSLRGS VSGDEALGVE VFNSALSAPL YWIATNAGLD GSVVVNKVSE LPAGQGFNAA TLEFGDLLAD GVVDPVKVTR SAVLNAASVA RMVLTTETAI VDKPAEEEDH GHGHHHGHAH
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