Gene Mkms_1109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_1109 
Symbol 
ID4614487 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp1195641 
End bp1196618 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content66% 
IMG OID639790785 
Producttransketolase, central region 
Protein accessionYP_937112 
Protein GI119867160 
COG category[C] Energy production and conversion 
COG ID[COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACCA GTTACCGCGC CGCCGTGCAC GACGCCCTGC GCGACGCTCT GCGCGACGAC 
GACAGGGTGC TACTCATGGG TGAGGACGTC GGTCGCTACG GCGGCACTTA TGCCGCGTCG
AAAGGCTTGC TGGAGGAATT CGGACCGGAG CGGGTCCGCG ACACCCCGTT GTCGGAGCTC
GGCTTCGTCG GAGTCGGAAT CGGCGCCGCG CTGGGCGGAT TGCGTCCCAT CATCGAGATC
ATGACGGTGA ATTTCAGCCT GCTCGCGCTC GATCAGATCG TCAACACCGC TGCGGCGCTC
AGGCATATGT CCGGTGGACA ATTCTCGGTG CCGATCGTGG TGCGGATGGC CACCGGAGCC
GGCAGGCAGC TGGCGGCCCA GCACTCACAC AGCTTGGAGT GCTGGTATGC ACACATCCCG
GGGATCAAGG TCGTGGCACC CGCGACGGTG GAGGACGCCT ACGGCATGAT GACCACCGCG
CTGGCAGACC CGGACCCGGT GATCGTGTTC GAGCATGTCG CGCTTTACAA CTCGTCGGCG
GATGGCACGA CGCTGCACGC CACCGACATA AGGCATGCGG CGGTTCGTCG CTCCGGATCC
GACGTCACCC TGATCACCTA CGGTGGGTCG CTGCCGAAGA CGCTCGACGC TGCCGACCAA
CTCGCACTCG CCGGCATCGA CTGCGAGGTG ATCGACCTCC GGGTACTGCG GCCGCTGGAC
ACGGCCACCT TCGTGGAGTC CGTGCGCAGG ACCCACCGCG CCGTCGTGGT CGACGAGGCG
TGGAAAACCG GAAGTCTGGC CGCCGAAATC AGTGCCCAGA TCGTCGAGAA CGCCTTCTAC
GATCTCGATG CGCCCGTGGC GAGGGTGTGC GGTGCAGAAG TCCCGGTGCC CTATGCCAAG
CACCTCGAGC AGGCCGCCCT ACCGCAGGCC GGTCAGATTG CGACCGCGGT CAGGGACCTC
TGCGGCGGCC CAGCATGA
 
Protein sequence
MKTSYRAAVH DALRDALRDD DRVLLMGEDV GRYGGTYAAS KGLLEEFGPE RVRDTPLSEL 
GFVGVGIGAA LGGLRPIIEI MTVNFSLLAL DQIVNTAAAL RHMSGGQFSV PIVVRMATGA
GRQLAAQHSH SLECWYAHIP GIKVVAPATV EDAYGMMTTA LADPDPVIVF EHVALYNSSA
DGTTLHATDI RHAAVRRSGS DVTLITYGGS LPKTLDAADQ LALAGIDCEV IDLRVLRPLD
TATFVESVRR THRAVVVDEA WKTGSLAAEI SAQIVENAFY DLDAPVARVC GAEVPVPYAK
HLEQAALPQA GQIATAVRDL CGGPA