Gene Mkms_1066 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_1066 
Symbol 
ID4614587 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp1152161 
End bp1152880 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content70% 
IMG OID639790743 
Productputative transmembrane anti-sigma factor 
Protein accessionYP_937070 
Protein GI119867118 
COG category[K] Transcription 
COG ID[COG5662] Predicted transmembrane transcriptional regulator (anti-sigma factor) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.202021 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAAG CTCTGGGCGA TCCCTATCTG CAATGGGACG CCGCCTACGT GCTTGGCTCG 
TTGTCCAGCG CCGATCGGCG CGAGTTCGAG GCGCACATGC AGACCTGCGA CCGGTGTCGG
GCGGCCGTCG CCGAGCTCAG CGGCATACCC GCCCTGTTGT CGATGCTCGA CGCCGACGAA
GTCGACGGTC AACTCGACGG CGACGAGCCC GAACCGCCGC CGCTGCGGCC CGAGGTGCTG
GATTCGGTAC TCGACAAGGT CAAATGGCGC AGGCGCCGGT CGCGGTGGAT GACGTCGGCG
GCGGTGGGAT TGGCGGCCGC AGTGCTCGCC GTCGGGCTGG TCATCGCGAT CCGTCCGGGC
GCCGTCGGAA TGCAGAACGG CACGCCGGAG GTGACCGCGG CGACCTACGA GATGACCAAG
CTCGCGCCGA CACCGTTCAA CGCGACCGTG AGCCTGTCCG ATTTCGGCTG GGGCACCCGT
ATCGACATGG CCTGCACGTA CGGCCAATGG TCCGGCGGCG GGCCCGCCGC GCCGCCGAGC
CGGCTGGGCA TGGTGGTGGT CGGCCGCGAC GGCACCCGCT CGGAGATCGC GACGTGGCTG
GGACTGTCCG GCGCGACGGC CCTGCCGAGC GGCAACACCA CGCTGCACCG CGACGACATC
GCTGCGGTGC AGCTGGTCGC GGCCGACACC CGTGAGGTGC TGCTCGAGAA GACGCTGTGA
 
Protein sequence
MIEALGDPYL QWDAAYVLGS LSSADRREFE AHMQTCDRCR AAVAELSGIP ALLSMLDADE 
VDGQLDGDEP EPPPLRPEVL DSVLDKVKWR RRRSRWMTSA AVGLAAAVLA VGLVIAIRPG
AVGMQNGTPE VTAATYEMTK LAPTPFNATV SLSDFGWGTR IDMACTYGQW SGGGPAAPPS
RLGMVVVGRD GTRSEIATWL GLSGATALPS GNTTLHRDDI AAVQLVAADT REVLLEKTL