Gene Mkms_1065 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_1065 
Symbol 
ID4614586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp1151664 
End bp1152164 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content70% 
IMG OID639790742 
ProductRNA polymerase sigma factor SigL 
Protein accessionYP_937069 
Protein GI119867117 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.279523 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGATC CGGAAGCCAC GATGATGCGC GTGCTCTACG ACGAGCACGC CGATGCATTG 
TGGCGGTACG CGCTCAAACT GACCGGTGAC GCCGCGACCG CCGAGGATGT CGTCCAGGAG
ACGCTGCTGC GGGCCTGGCG GCACCGGCCG AACGGGTCGG CGCGGGCCTG GTTGTTCACC
GTGGCCCGCA ATCTGGTGAT CGACGAGCGG CGCAGCGCGC GCTACCGCCG CGAGGCCGGG
ACCCCGGACG TCGACACCGT GGCGCAGCCC AGCGAACCGG ACAAGGTGGA CTCCGCGCTG
GACCGGATGC TGATCGGCTC GGCGCTCGCG CAGTTGTCCG AGGACCACCG GGCGGTCGTC
CGGCGCGCGT ACTACCAGGG GTGGACGACG GGGCAGATCG CGGCGGAACT CGAGATCCCG
GAGGGGACCG TGAAGTCCCG GCTGCACTAC GCCGTGCGGG CGTTGCGACT GAACCTGCAG
GAGATGGGGG TGACGCGATG A
 
Protein sequence
MDDPEATMMR VLYDEHADAL WRYALKLTGD AATAEDVVQE TLLRAWRHRP NGSARAWLFT 
VARNLVIDER RSARYRREAG TPDVDTVAQP SEPDKVDSAL DRMLIGSALA QLSEDHRAVV
RRAYYQGWTT GQIAAELEIP EGTVKSRLHY AVRALRLNLQ EMGVTR