Gene Mkms_1015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_1015 
Symbol 
ID4614679 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp1109014 
End bp1109622 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content71% 
IMG OID639790692 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_937019 
Protein GI119867067 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.393084 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTGGTC GCGGTGGGCG CGACCAAGCA CGCCGAAATC ACTCGGGAAA AGGGCGTCGG 
AGTTCGGGGC GCAACGGCGA CGATGAGGGT GTGAGCGGCG AACCAGACGG TGACGACGCT
CCGCGGACCC TGCTGGCGCT CTACGACGAT GCCCTGCCGA CGGTGTACGG CTACTTCGTC
AGACGCTGTC CGGACCGCGG AACCGCCGAG GACCTGACGT CGGAGACCTT CCTGGCGGCG
ATGGACGCCG CCCGGCGGGG CACCTCCGCG CCGATCAGCG TGCCGTGGCT GATCGGGGTG
GCCCGGCACA AACTGGCCGA CCACTACCGG CGCCGACACG ACCGGCACGC GGTCCCGGTC
GGCGAGGTGC CCGAACCCGG TGAGCCTGTC GACGGCTGGG AGGCCGAACT GGACCGGATC
GTCGCCGAGA GCGTGCTGGC GAAACTCGCC GAACAGCACC GGACGGTACT CGCGCTGCGC
TATCTCGACG GCTGTTCGGT CCCCGAATGC GCCGAGTTGA TCGGCCGGAC GGTGCACGCC
ACCGAGGCCC TGCTGGTGCG GGCCCGTCGC GCATTCCGCT CGCACTACCC GGAAGGAGGC
ACGCCGTGA
 
Protein sequence
MAGRGGRDQA RRNHSGKGRR SSGRNGDDEG VSGEPDGDDA PRTLLALYDD ALPTVYGYFV 
RRCPDRGTAE DLTSETFLAA MDAARRGTSA PISVPWLIGV ARHKLADHYR RRHDRHAVPV
GEVPEPGEPV DGWEAELDRI VAESVLAKLA EQHRTVLALR YLDGCSVPEC AELIGRTVHA
TEALLVRARR AFRSHYPEGG TP