Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mkms_0988 |
Symbol | |
ID | 4614652 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. KMS |
Kingdom | Bacteria |
Replicon accession | NC_008705 |
Strand | + |
Start bp | 1081239 |
End bp | 1085186 |
Gene Length | 3948 bp |
Protein Length | 1315 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639790665 |
Product | DNA-directed RNA polymerase subunit beta' |
Protein accession | YP_936992 |
Protein GI | 119867040 |
COG category | [K] Transcription |
COG ID | [COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit |
TIGRFAM ID | [TIGR02386] DNA-directed RNA polymerase, beta' subunit, predominant form |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.077101 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.709558 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTAGACG TCAACTTCTT CGATGAGCTC CGGATCGGCC TCGCCACCGC CGACGACATT CGTCAGTGGT CCTACGGTGA GGTCAAGAAG CCGGAGACCA TCAACTACCG CACGCTCAAG CCGGAGAAGG ATGGCCTGTT CTGCGAGAAG ATCTTCGGAC CGACTCGCGA CTGGGAGTGC TACTGCGGCA AGTACAAGCG CGTCCGCTTC AAGGGCATCA TCTGTGAGCG CTGCGGCGTC GAGGTGACCC GCGCCAAGGT GCGTCGTGAG CGGATGGGCC ACATCGAGCT GGCCGCACCC GTCACGCACA TCTGGTACTT CAAGGGTGTG CCGTCGCGGT TGGGCTACCT GCTCGACCTG GCCCCGAAGG ATCTCGAGAA GATCATCTAC TTCGCGGCCT ACGTCATCAC CGACGTCAAC GACGAGATGC GCCACAACGA GCTCTCGACC CTCGAGGCCG AGATGGTCGT CGAGAAGAAG GCCGTCGAGG ATCAGCGCGA CGCCGACCTG GAGGCCCGCG CCCAGAAGCT CGAGGCCGAC CTGGCCGAGC TCGAGGCCGA AGGCGCCAAG AGCGACGTGC GCCGCAAGGT GCGCGACGGC GGCGAGCGGG AGATGCGTCA GCTCCGCGAC CGGGCCCAGC GTGAGCTGGA CCGGCTCGAC GAGATCTGGA CCACCTTCAC CAAGCTGGCT CCCAAGCAGC TCATCGTCGA CGAGGTGCTC TACCGCGAGC TCGTCGACCG TTACGGCGAG TACTTCACCG GTGCCATGGG CGCGGAGTCG ATCAAGAAGC TCATCGAGAA CTTCGACATC GAGGCCGAGG CCGAGAACCT GCGCGAGACC ATCCGCAGCG GCAAGGGTCA GAAGAAGCTG CGCGCGCTCA AGCGACTGAA GGTCGTCGCG GCGTTCCAGA CGAATCGCAA CTCGCCCATG GGCATGGTGC TCGACGCCGT TCCGGTGATC CCGCCGGAGC TGCGCCCGAT GGTTCAGCTC GACGGTGGCC GCTTCGCCAC CTCCGACCTG AACGACCTGT ACCGCCGCGT GATCAACCGC AACAACCGGT TGAAGCGACT GATCGACCTC GGCGCGCCCG AGATCATCGT CAACAACGAG AAGCGCATGC TCCAGGAGTC GGTGGACGCG CTGTTCGACA ACGGCCGTCG CGGCCGGCCC GTCACCGGGC CCGGTAACCG TCCGCTCAAG TCGCTGTCCG ATCTGCTCAA GGGCAAGCAG GGCCGGTTCC GTCAGAACCT GCTCGGTAAG CGCGTCGACT ACTCGGGCCG TTCGGTCATC GTTGTGGGTC CCCAGCTGAA GCTGCACCAG TGCGGTCTGC CGAAGCTGAT GGCGCTCGAG CTGTTCAAGC CGTTCGTGAT GAAGCGTCTG GTCGACCTGA ACCACGCGCA GAACATCAAG AGCGCCAAGC GCATGGTGGA ACGTCAGCGT CCGCAGGTGT GGGACGTGCT CGAAGAGGTC ATCGCCGAGC ACCCGGTTCT GCTGAACCGC GCACCCACGC TGCACCGCCT CGGTATCCAG GCCTTCGAGC CGCAGCTGGT CGAGGGTAAG GCCATCCAGC TGCACCCGCT GGTCTGCGAG GCGTTCAACG CCGACTTCGA CGGCGACCAG ATGGCCGTGC ACCTTCCGCT GAGTGCGGAG GCGCAGGCCG AGGCCCGCAT CCTGATGCTG TCCTCGAACA ACATCCTGTC GCCCGCGTCG GGTAAGCCGC TGGCCATGCC GCGTCTGGAC ATGGTCACCG GGCTGTACTT CCTGACCACG ATGATCGAGG GCGACAAGGG CGAGTACCGT CCCGCCGCCA CGGATCAGCC GGAGGAGGGC GTGTACAGCT CGCCCGCCGA GGCGATCATG GCGATGGACC GCGGTGCGCT GAGCGTGCGC GCGAAGATCA AGGTGCGGCT GACCCAGCTG CGGCCGCCGG CCGCCCTGGA GGCCGAGCTG TTCGAGAACG GGTGGAAGCC GGGCCTGGCC TGGACCGCCG AGACGACGCT CGGTCGCGTG ATGTTCAACG AGCTGCTGCC GATCTCGTAT CCGTTCATCA ACGAGCAGAT GCACAAGAAG GTGCAGGCCC GGATCATCAA CGATCTGGCC GAGCGCTTCC CGATGATCGT CGTCGCACAG ACCGTCGACA AGCTCAAGGA CGCCGGTTTC CACTGGGCCA CCCGTTCGGG TGTCACGGTC TCGATGGCCG ACGTGCTCGT GCCGCCGCAG AAGCAGGAGA TCCTCGACCG CTACGAGGCG GAAGCCGACG GGATCGAGCG CAAGTACCAG CGTGGCGCCC TGAACCACAA GGAGCGCAAC GACTCGCTGG TCAAGATCTG GCAGGACGCC ACCGAAGAGG TCGGTAAGGC CCTGGAGGAG CACTACCCGG CGGACAACCC GATCATCACG ATCGTGAAGT CGGGCGCCAC GGGTAACTTC ACGCAGACCA GAACGCTGGC CGGCATGAAG GGTCTGGTGA CCAACCCGAA GGGTGAGTTC ATCCCGCGGC CGATCAAGTC CTCGTTCCGC GAGGGCCTGA CGGTGCTGGA GTACTTCATC AACACCCACG GCGCCCGTAA GGGTCTGGCG GACACGGCAC TTCGTACCGC CGACTCGGGT TACCTGACCC GTCGTCTGGT CGACGTTTCG CAGGACGTGA TCGTCCGCGA GCACGACTGC GAGACCGAGC GTGGCATCAA CGTCACGCTG GCCGAGCGTC AGCCCGACGG CAGCCTGATC CGCGATCCGC ACGTCGAGAC CTCGGCGTTC GCCCGCACCC TGGCCACCGA CGCGGTCGAC GCCGACGGCA ACGTCGTCAT CGAGCGTGGA CACGACCTGG GCGACCCGGC CATCGACAAG CTGCTGGCGG CCGGCATCGA CCACGTCAAG GTGCGTTCGG TGCTGACCTG TGCGTCGGCC ACCGGCGTGT GCGCCATGTG CTACGGCCGT TCGATGGCGA CCGGCAAGCT GGTCGACATC GGCGAGGCCG TCGGCATCGT GGCCGCGCAG TCCATCGGTG AGCCCGGCAC GCAGCTGACC ATGCGCACCT TCCACCAGGG CGGTGTGGGT GAGGACATCA CCGGCGGTCT GCCCCGCGTG CAGGAGCTCT TCGAGGCCCG CGTGCCGCGG AACAAGGCGC CGATCGCCGA CGTCTCCGGC CGTGTGCAGC TCGAGGAGGG TGAGCGCTTC TACAAGATCA CCATCGTCCC GGACGACGGT GGCGAGGAAG TGGTCTACGA CAAGCTCTCC AAGCGTCAGC GCCTGCGTGT GATCAAGCAC GAGGACGGCT CCGAGGGCGT GCTCTCCGAC GGCGACCACG TCGAGGTCGG CGACCAGCTC ATGGAGGGTT CGGCCGATCC GCACGAGGTC CTGCGTGTGC AGGGTCCGCG TGAGGTGCAG ATCCACCTGG TCCACGAGGT CCAGGAGGTC TACCGGGCCC AGGGCGTGTC GATCCACGAC AAGCACATCG AGGTCATCGT CCGGCAGATG CTGCGTCGCG TCACGATCAT CGATTCGGGT GCGACGGAGT TCCTGCCCGG CTCGCTGACC GAGCGTGCGG AGTTCGAGTC GGAGAACCGT CGCGTCGTCG CGGAAGGTGG CGAGCCCGCC GCCGGCCGTC CGGTGCTGAT GGGTATCACG AAGGCATCGC TGGCCACCGA TTCGTGGCTG TCGGCGGCGT CGTTCCAGGA GACCACTCGC GTGCTGACCG ATGCGGCGAT CAACTGCCGC AGCGACAAGC TGCAGGGTCT GAAGGAGAAC GTGATCATCG GCAAGCTGAT CCCGGCCGGT ACCGGTATCA ACCGCTACCG CAACATCCAG GTGCAGCCGA CCGAAGAGGC CCGCGCTGCG GCGTACACGA TCCCGTCCTA CGAGGATCAG TACTACAGCC CGGACTTCGG CCAGGCGACC GGCGCTGCGG TGCCGCTGGA CGATTACGGG TACAGCGACT ACCGCTAG
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Protein sequence | MLDVNFFDEL RIGLATADDI RQWSYGEVKK PETINYRTLK PEKDGLFCEK IFGPTRDWEC YCGKYKRVRF KGIICERCGV EVTRAKVRRE RMGHIELAAP VTHIWYFKGV PSRLGYLLDL APKDLEKIIY FAAYVITDVN DEMRHNELST LEAEMVVEKK AVEDQRDADL EARAQKLEAD LAELEAEGAK SDVRRKVRDG GEREMRQLRD RAQRELDRLD EIWTTFTKLA PKQLIVDEVL YRELVDRYGE YFTGAMGAES IKKLIENFDI EAEAENLRET IRSGKGQKKL RALKRLKVVA AFQTNRNSPM GMVLDAVPVI PPELRPMVQL DGGRFATSDL NDLYRRVINR NNRLKRLIDL GAPEIIVNNE KRMLQESVDA LFDNGRRGRP VTGPGNRPLK SLSDLLKGKQ GRFRQNLLGK RVDYSGRSVI VVGPQLKLHQ CGLPKLMALE LFKPFVMKRL VDLNHAQNIK SAKRMVERQR PQVWDVLEEV IAEHPVLLNR APTLHRLGIQ AFEPQLVEGK AIQLHPLVCE AFNADFDGDQ MAVHLPLSAE AQAEARILML SSNNILSPAS GKPLAMPRLD MVTGLYFLTT MIEGDKGEYR PAATDQPEEG VYSSPAEAIM AMDRGALSVR AKIKVRLTQL RPPAALEAEL FENGWKPGLA WTAETTLGRV MFNELLPISY PFINEQMHKK VQARIINDLA ERFPMIVVAQ TVDKLKDAGF HWATRSGVTV SMADVLVPPQ KQEILDRYEA EADGIERKYQ RGALNHKERN DSLVKIWQDA TEEVGKALEE HYPADNPIIT IVKSGATGNF TQTRTLAGMK GLVTNPKGEF IPRPIKSSFR EGLTVLEYFI NTHGARKGLA DTALRTADSG YLTRRLVDVS QDVIVREHDC ETERGINVTL AERQPDGSLI RDPHVETSAF ARTLATDAVD ADGNVVIERG HDLGDPAIDK LLAAGIDHVK VRSVLTCASA TGVCAMCYGR SMATGKLVDI GEAVGIVAAQ SIGEPGTQLT MRTFHQGGVG EDITGGLPRV QELFEARVPR NKAPIADVSG RVQLEEGERF YKITIVPDDG GEEVVYDKLS KRQRLRVIKH EDGSEGVLSD GDHVEVGDQL MEGSADPHEV LRVQGPREVQ IHLVHEVQEV YRAQGVSIHD KHIEVIVRQM LRRVTIIDSG ATEFLPGSLT ERAEFESENR RVVAEGGEPA AGRPVLMGIT KASLATDSWL SAASFQETTR VLTDAAINCR SDKLQGLKEN VIIGKLIPAG TGINRYRNIQ VQPTEEARAA AYTIPSYEDQ YYSPDFGQAT GAAVPLDDYG YSDYR
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